Gene Sputcn32_3102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3102 
Symbol 
ID5079742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp3606596 
End bp3607330 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content48% 
IMG OID640500300 
Producthypothetical protein 
Protein accessionYP_001184614 
Protein GI146294190 
COG category[S] Function unknown 
COG ID[COG3821] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATTTT CGCTGTTAGA TATTTCTGCA TTGGTGTGGT TTATCGTTTC TTGGGCTGGC 
TATACCGCTT TTGCGCGGCG TAAAGCAAGG GATACTAACT GCATCGCCCG TGGATTACAC
AAGCACAGGA TTTATTGGAT GCTTGAAGTG ATGACCCGTG GTGTACGTGT AGGTGATGCT
GCGCTACTGG CGAACCTTGA GCGCAATATT GCATTTTTTG CGTCAACGAC GCTGTTTGTA
CTCGCGGGTG TACTTACCTT ATTTGCGCAA GTAGAGCGTC TTGAAAGTGT TATTGCGACC
ATCCCTTTTG CCGCGCCACC CAATCATGCA CTAGTGCAAG TTAAGCTAGC TCTACTTGTT
GGGATCTTTG TGATGGCCTT TTTCCAATTC ACTTGGTCAA TGCGCCAATA TGGCTTTGTA
AACGTCATGA TTGGTGCGGG CCCATTAGAT GCTGATGGTT CAAACGAAAA TCTTAGGGGC
TATGCAAGGC AGATGGCCAC AGTGCAAGAT CAGGCCGCCC ATTCCTATAA CTATGGTCTA
CGGGCCTATT ACTTCTCCAT GGCGGTGCTT TGCTGGTTTG TTCACCCTAC CCTCTTTATT
TCAGCTAGCT TATTTGTGGT TATTACTTTA TATCGCCGCG AATTTAAGTC TCGCGCAGTG
ATGGCAATTA CCGCTGCAAA GGGGCATTTA GGTGCGGAGT ATGAAACTCG CGAGGCCAAA
CGCCAACAAA GCTGA
 
Protein sequence
MTFSLLDISA LVWFIVSWAG YTAFARRKAR DTNCIARGLH KHRIYWMLEV MTRGVRVGDA 
ALLANLERNI AFFASTTLFV LAGVLTLFAQ VERLESVIAT IPFAAPPNHA LVQVKLALLV
GIFVMAFFQF TWSMRQYGFV NVMIGAGPLD ADGSNENLRG YARQMATVQD QAAHSYNYGL
RAYYFSMAVL CWFVHPTLFI SASLFVVITL YRREFKSRAV MAITAAKGHL GAEYETREAK
RQQS