Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3094 |
Symbol | |
ID | 5079734 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 3595128 |
End bp | 3595949 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640500292 |
Product | Ion transport 2 domain-containing protein |
Protein accession | YP_001184606 |
Protein GI | 146294182 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.533818 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACAGATA AAACACCATG GTCGCTCCGT TCGCTTAATG GCCCATCACC TATTGAGCTG GCGATGATGT TGTTATCCCT ACTGTCGGTG ATCATCGTCC TCGTCATGAC CTTTGTCCGA CTCGACACTG AAACCTATCG TTTACTCTTT TTTATTGATA CCAGTGTCTG TCTGATTTTT ATGGCCAACT TTTTTGTGGG TTTATTCCGT GCTCGCAATA AGACGTTTTA TCTACGCCAT CACTGGATTG ACTTTATTGC AAGCATTCCA GCAATAGAAG CACTACGTAT CGCGCGTGTT TTCCAGATCC TACGAGTGAT CCGTTTGATC CGCATGAGTA GCTCACTGCT ATTACCGCTG ATAAAACAAC GAAAACAAGC CACCTTAGCC AGTCTATTAG TTGCCATGGT AACAATACTT ACCTTCGCTT CCATCATTAT TTTAATTGTT GAAAGTGGCA CTGAAGGTGC CAATATTCAA ACGGCTGAAC AGGCGATTTG GTGGGCTCTA GTGACTATTT CTACCGTAGG TTACGGAGAT TATTATCCGG TAAGTACAGT CGGGCATATT GTTGGTGGTC TGGTTATTGT TAGCGGCGTC AGTTTCTTCG GGGTTATTTC AGGTTATATG GCATCGGTAT TTGTCGCACC CGATGAAACA GAGCAGCAAG AACGTCAAGA TGCCCATAAG GCCGAAATTA AGTCTGAGCT TGAACTCGCA CTCCTTAGGA TGGAAGATAA CCAAAAGCAA ATTGAAGAAA ATCAGACTAA AATGTTGCAG CAAATTACAG AGTTAAGACA AGCCTTAGAA AATAAAAAAT GA
|
Protein sequence | MTDKTPWSLR SLNGPSPIEL AMMLLSLLSV IIVLVMTFVR LDTETYRLLF FIDTSVCLIF MANFFVGLFR ARNKTFYLRH HWIDFIASIP AIEALRIARV FQILRVIRLI RMSSSLLLPL IKQRKQATLA SLLVAMVTIL TFASIIILIV ESGTEGANIQ TAEQAIWWAL VTISTVGYGD YYPVSTVGHI VGGLVIVSGV SFFGVISGYM ASVFVAPDET EQQERQDAHK AEIKSELELA LLRMEDNQKQ IEENQTKMLQ QITELRQALE NKK
|
| |