Gene Sputcn32_3061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3061 
SymbolmtgA 
ID5079803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp3550239 
End bp3551024 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content46% 
IMG OID640500259 
Productmonofunctional biosynthetic peptidoglycan transglycosylase 
Protein accessionYP_001184573 
Protein GI146294149 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0744] Membrane carboxypeptidase (penicillin-binding protein) 
TIGRFAM ID[TIGR02070] monofunctional biosynthetic peptidoglycan transglycosylase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.631033 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCAC CTTTGTATGC GATGCGGGAT CATGTCAATC ATCCCCGAGT TAATAGAACC 
AATCATCCCG CCCCCAAGCC AGGTAAGCGT GGCTTTAAGC GCTTAATTTC TTGGTTAGTT
AAGATTGTAT TTTGGCTGTG GTTAAGCTCG ATCTTTATCG TCGTCTTTTT GCGTTTTGTC
GATCCGCCTA TGTGGACTTG GCGAATTGAA CGCGCTTTGT TTCCGCCTGC CACTATCACT
GAGGTTCGTC ATCAATGGCG GGCTATTGGG CAAATTTCCC CTGAGTTACA GTTGGCGGTG
ATTGCAGCAG AAGATCAAAA ATTTGCGGAT CATACGGGTT TTGATTTAGC CGCAATCAGC
GCTGCGTTTG AATATAACCA GAAGGGGAGT AAGGTACGCG GTGCCAGTAC GCTGAGTCAG
CAAGCTGCGA AGAATCTATT TATGTGGTCT AGCCGCAGTT TTTTGCGTAA AGGAATAGAA
GCTTGGTTCA CCCTACTCAT GGAACTGATT TGGGATAAGT CACGCATTCT TGAAGTGTAT
TTAAACATTG TCGAATTTGG CCCTGGTATA TACGGGGCAG AGGCTGCCGC TCAGTATTAC
TTTGGCAAAT CTGCTGCAAA ACTCACCCGT TATGAGGCAT CTTTACTTGC TGCTGTGCTA
CCTAATCCAT GGCGTTATAA GGTTTCTCCT CCTTCATCTT ATGTTGAACA GCGATCAGCT
TGGATCCGTA AACAAATGCG TCAACTTGGT GAAGTGACCC TTAATAAAGT ACACGGTGCT
GAATAA
 
Protein sequence
MTAPLYAMRD HVNHPRVNRT NHPAPKPGKR GFKRLISWLV KIVFWLWLSS IFIVVFLRFV 
DPPMWTWRIE RALFPPATIT EVRHQWRAIG QISPELQLAV IAAEDQKFAD HTGFDLAAIS
AAFEYNQKGS KVRGASTLSQ QAAKNLFMWS SRSFLRKGIE AWFTLLMELI WDKSRILEVY
LNIVEFGPGI YGAEAAAQYY FGKSAAKLTR YEASLLAAVL PNPWRYKVSP PSSYVEQRSA
WIRKQMRQLG EVTLNKVHGA E