Gene Sputcn32_3056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3056 
Symbol 
ID5079798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp3545145 
End bp3545651 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content43% 
IMG OID640500254 
ProductMarR family transcriptional regulator 
Protein accessionYP_001184568 
Protein GI146294144 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGATAC ATGAATCTCA TCTCCAAGTT TATCCCACTG ATCTTGGCGA AAATGCTAAT 
TCAGACAATG CTTTATGTTT AGAGCATCAA GTGTGTTTCT CACTCTATAG TGCCGCCAAT
GCGATGATAC GAGCCTACCG TCCTTTATTG GATAAGTTGG ATTTAACCTA TCCTCAGTAT
TTGGTGATGC TAGTGCTATG GGAAGAACAG GGGATCAGTG TTAAAACCTT AGGAGATAAA
CTGTTTCTCG ATTCAGGCAC CTTAACACCT TTGCTTAAAC GTCTTGAATC GAAAGGATTA
GTGCGCCGAG GTCGCAGTGA GTCAGATGAG CGGGTGCGAG TATTGGATTT AACGCCAGAG
GGCATCGCAC TTAAATCTCA AGCGAGTGAC ATTCCCCATT TAATGCGTTG TAAAGTGGGG
GGCGAGTTGA GTGAGCTTAA AGCCTTAAAA GCACTTTGTG ATAAAGCCCT TAAGCAATTA
CATGCCAGTG TTGACCAAGA TATTTGA
 
Protein sequence
MPIHESHLQV YPTDLGENAN SDNALCLEHQ VCFSLYSAAN AMIRAYRPLL DKLDLTYPQY 
LVMLVLWEEQ GISVKTLGDK LFLDSGTLTP LLKRLESKGL VRRGRSESDE RVRVLDLTPE
GIALKSQASD IPHLMRCKVG GELSELKALK ALCDKALKQL HASVDQDI