Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3039 |
Symbol | |
ID | 5079781 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 3520361 |
End bp | 3521200 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640500237 |
Product | hypothetical protein |
Protein accession | YP_001184551 |
Protein GI | 146294127 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGGACT CAGACATTTT AATGCTAGCA GAAGAAGGCG AGTCAGCATC CGAGGTATCC GCTCGCAAAA AAGCCCTGCT ACTCGGTCGC CAATTAGGGC TCGCCAGTGA GCAAGAATAT CGCCCCGCGA ACGCTTCAAT AGCCGAACGT GCAGAACATA GAGCCCGCAA GTTATCGAGC CAATATCAGG CCAATGTGGA AACCATTTTC GCCTTAGCCC TTAGTTACAC CCACTCAGAT GTCACTGGGG TCGATCTCGA TCCCGATTGG AGTCATCAAT TCTTCTTGAT GGCGGAACAA ATCCATAACC GTAAGATGCA AGATTTGTGG GCTCGGATAT TGTCGAGCGA GATAGTGAAT CCGGGAAACT TCAGTCTACG TACCTTAGCG CTGCTCAAGC AACTGACCCA CAGGGAAGCA CAAATTCTTG AAAAAGCCCT TGGCATGGCG GCTAAAGTGA ATAATGAACA ACGTCTTAAA CTGATCAGTG GTTATCGGTT ATCTGGGGGG ATTGGGCAAT ACTTTAGAAA AAACACCACA GTAAATCTTG GCCTATCTCA ATTTGGCCTG CCTTATTCCA GTATTTTAAC CTTAGTTGAT GCGGGTATTT TGCACAGTAG CGAGTTTGAA ACAGGGCTTC TTAATAGCAA AACCCCAATC CAATTTGCCA TGCCTAGTAT TCAAATGAAG TTAACACCTA AGAGCGGCCA TTTACTATTC ACTTATTATC GCTTAACCCC CATAGGTGAT GAACTGGCTT TACTTGTACA ACCCAAAACA GATCAAGAAT ACGTAAAAGC ACTGCAACTA CTATTTGCCA AAGATTTCAA AATAGAATAG
|
Protein sequence | MKDSDILMLA EEGESASEVS ARKKALLLGR QLGLASEQEY RPANASIAER AEHRARKLSS QYQANVETIF ALALSYTHSD VTGVDLDPDW SHQFFLMAEQ IHNRKMQDLW ARILSSEIVN PGNFSLRTLA LLKQLTHREA QILEKALGMA AKVNNEQRLK LISGYRLSGG IGQYFRKNTT VNLGLSQFGL PYSSILTLVD AGILHSSEFE TGLLNSKTPI QFAMPSIQMK LTPKSGHLLF TYYRLTPIGD ELALLVQPKT DQEYVKALQL LFAKDFKIE
|
| |