Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3021 |
Symbol | mdoD |
ID | 5079763 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 3504620 |
End bp | 3506404 |
Gene Length | 1785 bp |
Protein Length | 594 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640500219 |
Product | glucan biosynthesis protein D |
Protein accession | YP_001184533 |
Protein GI | 146294109 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3131] Periplasmic glucans biosynthesis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTATCA TTGTCATCAA CAGTTCTCCA CAGGGCAGTC ATTGCATATT GCTTATATGT GCAGCGAAGT GTCAGGAAGT TACACCAATT CAGAGTCTGC TTATGCAACC CAATTTATTT CCCGAACAAA GAAATGTTAA CCGTGAATTG ATGGCTATGC CGTCATCAGT TGAAATTCAA TCTACTCGTG GACGTTTGCA ACGTATGGTT GGCAGTGTAT TGCTGACCTG TAGTGTATTG CTAAGTCTTT CCGCCTGCGC TGCAGGTAAG GCGAGCGCGC CGCAAGAGGG CGAAGAGTTC AGTTATGCAT GGCTTAAGGG TCATGCTCGT ACACTTGCTG CTGAGTCCTA TGTTAGTCAC AAGGGCGAAC TGCCTAAAAG CCTGCAGGGG ATGAGCTGGG ATGATTACCA GCAGTTCCAT TTTAAGAAAA AAGCGGCAAT GTGGCGTGAT CAGGATTCTG AGTTTCGTGC CGAATTATTT CACCTAGGTT TGTATTTTGA TACGCCAGTA CATATCTATG AGTTAGATGA GAGTAAGGCC AAACTTATCG AATACTCACC ATCGATGTTT GATTACGGCA AGTCTAAAGT GAAAGGAAGT CAGCTACCTA AAGATCTCGG TTTTGCTGGA TTTAGAATGC AGTTTAATAC CGATTGGCAG CGTGATGTGG TGGCTTTCCT TGGGGCGAGT TATTTCCGAG CGGTAGGTCA AGAGATGCAA TACGGTTTAT CAGCCCGTGG TTTGGCGGTT GATACTGCAT TACCAAAACC TGAAGAGTTT CCAATGTTTA CTCATTTCTG GTTAGAGAAA CCTAAACCAG GCTCGAATAT TGCCACCGTC TATGCATTGT TAGATTCTCC AAGTGTGACT GGCGCTTACC GTTTTGACAT TGAGCCAGGT GAGCGTTTGA AGATGAAAGT CGATGCGGCG ATTTATCCCC GTAAAGCGAT TGAGCGTTTA GGTGTCGCGC CACTAACCAG TATGTATATG GTGGGTGAAA ACGATCGCCG TACTGGTTAT GACTGGCGTC AAGAGATCCA CGATTCGGAT GGCTTAGCAA TGCATACCGG GAGCGGCGAA TGGATTTGGC GTCCACTCGC TAACCCAGAA AATCTGCGAT TCAACGCCTA TAGCGATGAA AATCCAAGAG GTTTTGGTTT AATGCAGCGC GATCGTAATT TTGATCATTA TCAGGATGAC GGTGTTTTCT ACGAAAAACG TCCAAGTTTA TGGATTGAAC CTACGGGAAG TTGGGGTAAA GGTTCTGTAC AGCTAGTGGA AATCCCAACG CTGGATGAAA CCTTCGATAA CATAGTGGCA TTTTGGAACC CTGCAGAGCC TATTTTACCA GGTCAAGAGT TGCTTTATAG CTACAACATG TATTGGGGAG GCATTCCACC TGTGCAATCA CCTCGTGCCC GTGTTGTTGA TACTTTCACT GGTTTAGGTG GTGTGGTTGG TCAGAAGCGC AAATATTACA GTAAGCGCTT TGTTATCGAT TTTGCTGGTG GCACTTTACC TATGTTAGGC AAAGATACTC AAGTAAAAGC GGTGATCAGT ACCTCACAAG GCCGTGTAGA AATCGAATCA GCACGTCCTT TAGCATCGAT TAATGGCTAT CGTGCTATGT TTGATGTAGT GCCTCCAGAG GACAGCGTTG AGCCAATTAA CCTAAGAGTT TACTTAGAAG TCGATGGTCA ACCACTGTCT GAAACTTGGA TGTATCAGTG GAATCCGCCC GCTAAGGATG ATCGTGAACT CTATAACGCG GGCCATCTGC AATAA
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Protein sequence | MVIIVINSSP QGSHCILLIC AAKCQEVTPI QSLLMQPNLF PEQRNVNREL MAMPSSVEIQ STRGRLQRMV GSVLLTCSVL LSLSACAAGK ASAPQEGEEF SYAWLKGHAR TLAAESYVSH KGELPKSLQG MSWDDYQQFH FKKKAAMWRD QDSEFRAELF HLGLYFDTPV HIYELDESKA KLIEYSPSMF DYGKSKVKGS QLPKDLGFAG FRMQFNTDWQ RDVVAFLGAS YFRAVGQEMQ YGLSARGLAV DTALPKPEEF PMFTHFWLEK PKPGSNIATV YALLDSPSVT GAYRFDIEPG ERLKMKVDAA IYPRKAIERL GVAPLTSMYM VGENDRRTGY DWRQEIHDSD GLAMHTGSGE WIWRPLANPE NLRFNAYSDE NPRGFGLMQR DRNFDHYQDD GVFYEKRPSL WIEPTGSWGK GSVQLVEIPT LDETFDNIVA FWNPAEPILP GQELLYSYNM YWGGIPPVQS PRARVVDTFT GLGGVVGQKR KYYSKRFVID FAGGTLPMLG KDTQVKAVIS TSQGRVEIES ARPLASINGY RAMFDVVPPE DSVEPINLRV YLEVDGQPLS ETWMYQWNPP AKDDRELYNA GHLQ
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