| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3003 |
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| Symbol | |
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| ID | 5079898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 3481710 |
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| End bp | 3483173 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640500201 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001184515 |
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| Protein GI | 146294091 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.32 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAC CTCAATCCAA TTTCCCTCAC TTGCAACTCA AAGATGGCAT CCTCAAAGAT
CAGCTTTATC ATGCGTTTAG AGAGGCCATT CTTGATGGAC GTTTGCACCC GCGAATGAAG
CTCCCATCCA GCAGAGCCTT GTCGGAAACC ATGCAGATTT CACGTAACTC AGTACTGCAA
GGGTTTGAGC GCCTGATTGA TGAAGGCTAT CTGCTGACTA AACCGGGATC GGGCACTTAT
GTGTCAGATA CCATCCCCGA TGAACTGATC GATATTCCCA ACAGCTCCCG AGAAAGTGCT
CAAGCCTTTG ATTCCAATGT AGACATTAAT CCACAGTTAA TAGAAATGGC GCGACTGAAA
GCGAAGGGAA ATACGGACCA CAGCCATAGC ATGCTTAATA TTGGCGTCGG ATGTGTCGAT
CTTTTCCCAC ACCAACTTTG GGGACGGCTG TTAGGCCGAG TTTGGCGGCA ATCGCGTAAA
ACCTTAGGTA AATCAAACCA TAGCGCGGGG TATTTGCCGT TGCGTGAGGC GATAAGTGAC
TATGCGCGTT CGACCCGCGG CCTCAATTGC ACACCTGAGC AGATCATCAT AGTCAATGGA
ACTCAGCAGG CCATTAACCT CACGGCGCAA GTCCTCCTCC AACAGGGAGA TGAAGTCTGG
CTTGATGAAC CTGGATATGA TGGCGCTTTA GGCGCATTTC TCTCACAAAA TATGCGAGTT
CGTCCTGTGA GTGTTGATGT TGAGGGTACA AATATTGCCG ATGCGATACA GCGGTATCCT
GCAGTGAAAC TGGCTTTTAC CGCGCCCTCA CACCAATTTC CCCTCGGTGG CATGCTAAGT
CTGCCACGAC GATTGGCCTT ACTCGATTGG GCCGCTGAGC AGAGTAAATG GATTTTAGAG
GATGACTATA ACGGTGAGTT TCGTTACAGC GCCCGCCCAA TACAGGCATT ACAAGGGCTC
GATAAATACC AAAGGGTGAT TTATGCAGGC ACCTTTTCCA AGATGCTACT GCCCGAATTG
CGACTCGGCT TTTTAGTAGT GCCCTCTAAA CTGGTACAGG CTTTTCAGCT AGCAAAGCAC
TACGCCGATA CGCACACGGC TCACCTAGAG CAAGCAACAT TAGCGCTGTT TATCACCGAA
GGACATTATG CGCGGCATGT TCGCCGAGTG CGAAAAGCCT GCTTAGCGCG CCAAACGGCG
CTAATCGCGG CAATTGAGCA GTATCTGCCT GACAAATTGT CCGTTCAAAC CTCAGACTCA
GGTATTCATC TGGTCTGTTG GCTAAAGGGC GATTTGACCG AAGAAAAAGT GATCAATAAA
TGCCGCCAAC TCAGTTTAGG TGCACAGCCT TTGTCTCGAT ATTGCCAAGC GCCCTATCCA
AGGCAAGCAA TCTTACTGGG CTATGCCGCT CATACGCCTG ATGAGCTGCG GGAAAGTATC
AAAAAACTGG CGCAGATCCT TTAA
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| Protein sequence | MKKPQSNFPH LQLKDGILKD QLYHAFREAI LDGRLHPRMK LPSSRALSET MQISRNSVLQ
GFERLIDEGY LLTKPGSGTY VSDTIPDELI DIPNSSRESA QAFDSNVDIN PQLIEMARLK
AKGNTDHSHS MLNIGVGCVD LFPHQLWGRL LGRVWRQSRK TLGKSNHSAG YLPLREAISD
YARSTRGLNC TPEQIIIVNG TQQAINLTAQ VLLQQGDEVW LDEPGYDGAL GAFLSQNMRV
RPVSVDVEGT NIADAIQRYP AVKLAFTAPS HQFPLGGMLS LPRRLALLDW AAEQSKWILE
DDYNGEFRYS ARPIQALQGL DKYQRVIYAG TFSKMLLPEL RLGFLVVPSK LVQAFQLAKH
YADTHTAHLE QATLALFITE GHYARHVRRV RKACLARQTA LIAAIEQYLP DKLSVQTSDS
GIHLVCWLKG DLTEEKVINK CRQLSLGAQP LSRYCQAPYP RQAILLGYAA HTPDELRESI
KKLAQIL
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