Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3000 |
Symbol | |
ID | 5079895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 3477746 |
End bp | 3478558 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640500198 |
Product | glutamate racemase |
Protein accession | YP_001184512 |
Protein GI | 146294088 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0796] Glutamate racemase |
TIGRFAM ID | [TIGR00067] glutamate racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAGCT CAATATTAGT TTTTGATTCA GGTTCAGGTG GACTGACTGT CGCGGCCGAA ATAAAAAAGA GAATCCCCAA CATACGGCTG AGTTACGTCT CTGACGCTGG CTTTTTCCCG TACGGAAAAA AGCCACACGA TATACTAAAA AAGCGAATTT TAGACGTTAT ATCCAAAGCA AGCTCACTGA CTCAACCCGA TATCATCGTT ATCGCCTGCA ATACAGCGAG TACCATTGCG CTAGACTTAC TTCGTACTGA ACTCAATATA CCTATTGTCG GCGTTGTCCC TGCGATAAAA CCTGCCGCTT CGTTATCAAA ATCAAAGGTA GTGATGGTAC TTGGCACTCA CACCACAGTG AACTCAGCTT ATGTGAAGAT GCTGATCACG AATTTCGCCA CAGAATGTAA GGTTTTAGTA GAAGACTCTG AAGTGCTGGT TCTCGCCTCA GAGCAAAAAC TTCTCGGCAA TGGGTTTGAT CCCGACATTG TAACTCAGGA AATTCAGCGT ATTTTTAGCA AACCCGATGC GTTTAATACC GATGTATTAG TGCTGGCTTG TACTCACTTT CCACTTATCA ATGCAGAAAT CAAAAATGCC CTTCCCCACC ACGTTACCGT CATTGATTCT GGATTAGCCA TTGCTAATCG AACGCACTCA TTGTTGAAAA TCGAACACCA AGCGTGTAGC CCGATACTCG ATCCAGAAAT AACGTTTTAC ACCACTGGGA ATGTAGATTC AGAACAAGCG AAACAAAGCA AAATTGAAGC ACTGCTTCAG TGCTCCATTA AATTTAAGCA GCTGTTATTG TAA
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Protein sequence | MDSSILVFDS GSGGLTVAAE IKKRIPNIRL SYVSDAGFFP YGKKPHDILK KRILDVISKA SSLTQPDIIV IACNTASTIA LDLLRTELNI PIVGVVPAIK PAASLSKSKV VMVLGTHTTV NSAYVKMLIT NFATECKVLV EDSEVLVLAS EQKLLGNGFD PDIVTQEIQR IFSKPDAFNT DVLVLACTHF PLINAEIKNA LPHHVTVIDS GLAIANRTHS LLKIEHQACS PILDPEITFY TTGNVDSEQA KQSKIEALLQ CSIKFKQLLL
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