Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2985 |
Symbol | |
ID | 5079880 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 3461227 |
End bp | 3461622 |
Gene Length | 396 bp |
Protein Length | 131 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640500185 |
Product | curli production assembly/transport component CsgF, putative |
Protein accession | YP_001184499 |
Protein GI | 146294075 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACATACA GGACGTTACT TGCCCTTGTC ACGTTATATG TGGCGAGCAG TGGTCAAGCC ACTGAATTGA TTTACACCCC CATTAATCCC AGTTTTGGCG GTAATCCACA AAATGGGACT TTTCTATTAA ATAAAGCCCA AGCCCAGAAT GACCATAAAT CTAGCTCGAC CGAGAAGGAC TTTGTCACCC GCTTTAAAGA ATCCCTAGAG CGTAACATTA TTAACTCCAT CACCCGCGGT GTGGCCGATG GTGAGATCAA AGATGGCGTT TATGATACTG GGGATTTTCG TATTGAGGTG GCTTCTACGG GTAATGGCGT GATGTTAACT ATCACTAACA CTCAAACTGG TGAAATTACA GTGATAGAAA TGCCGACGTT TGGAGGTCTT AGCTAA
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Protein sequence | MTYRTLLALV TLYVASSGQA TELIYTPINP SFGGNPQNGT FLLNKAQAQN DHKSSSTEKD FVTRFKESLE RNIINSITRG VADGEIKDGV YDTGDFRIEV ASTGNGVMLT ITNTQTGEIT VIEMPTFGGL S
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