| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2939 |
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| Symbol | carB |
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| ID | 5078166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3408068 |
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| End bp | 3411292 |
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| Gene Length | 3225 bp |
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| Protein Length | 1074 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640500139 |
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| Product | carbamoyl phosphate synthase large subunit |
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| Protein accession | YP_001184453 |
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| Protein GI | 146294029 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAAAAC GTACAGATAT AAAGAGTATT CTTATCCTAG GTGCAGGCCC GATTGTCATT
GGTCAGGCAT GTGAGTTTGA CTATTCAGGC GCCCAAGCCT GTAAAGCACT GCGTGAAGAA
GGTTACCGCG TCATTCTAGT GAACTCTAAC CCTGCCACTA TTATGACCGA CCCTGAAATG
GCCGATGCGA CTTATATCGA GCCAATTCAC TGGGAAGTGG TCCGCAATAT TATCGCCAAA
GAACGCCCTG ACGCGATTCT GCCAACCATG GGCGGCCAAA CCGCACTGAA CTGCGCATTA
GAACTCGAAG CCAAAGGTGT TTTAGCGGAA TTTAATGTTG AAATGATTGG CGCGACTGCC
GATGCGATTG ATAAAGCCGA AGATCGTAGC CGTTTCGACA AAGCCATGAA GAGCATTGGC
TTAGAGTGTC CACGTGCGGG TATCGCCCAC AGCATGGAAG AAGCCTACGG TGTGCTCGAG
CAAGTCGGTT TCCCTTGTAT TATCCGTCCT TCATTCACTA TGGGTGGCTC GGGTGGTGGT
ATTGCCTACA ACAAGGAAGA GTTTGAAGAA ATCTGTTCTC AAGGGTTAGA TTTATCGCCA
ACCAAAGAGC TGCTAATCGA TGAGAGCTTA ATCGGTTGGA AAGAATACGA GATGGAAGTG
GTTCGTGATC GTAACGACAA CTGCATCATC GTCTGTTCTA TCGAAAACTT CGATCCTATG
GGCGTACACA CCGGCGACTC TATCACAGTT GCACCCGCGC AAACTCTGAC AGACAAAGAA
TACCAAATCA TGCGTAACGC CTCTATGGCC GTACTGCGTG AGATCGGTGT TGAAACGGGC
GGTTCAAACG TACAGTTTGG TATTAACCCA ATCGATGGCC GTATGGTGAT CATCGAGATG
AACCCAAGGG TATCGCGCTC ATCTGCGCTG GCATCGAAAG CCACGGGATT CCCGATTGCA
AAAATCGCCG CTAAGTTAGC AGTCGGTTTC ACCCTTGATG AGCTGATGAA TGACATTACG
GGCGGTCGTA CGCCAGCGTC ATTCGAGCCT GCTATCGATT ACGTTGTGAC TAAAGTGCCA
CGCTTTAACT TTGAAAAGTT TGCCGGCGCG AATGACCGCT TAACCACACA GATGAAATCT
GTGGGTGAAG TGATGGCCAT CGGCCGTACT TTCCAAGAGT CACTGCAAAA AGCCTTGCGC
GGTTTAGAGG TTAGCCGTAA CGGTTTAGAC CCTATCACTG ATATGTCTAA ACCTGAAGCG
ATGTCACGTA TTCGCCTCGA GCTAAAAGAA CCCGGTTGTG ACCGTATTTG GTACATTGCT
GATGCGATGC GTGCGGGTCT TGGCCTTGAT GAAATCTTCC GTCTGACCAA TATCGACCCT
TGGTTCCTCG TGCAAATTGA AGAACTGATT AAACTCGAAG GCGTTGTTGC CGAGGCGGGT
TTGGCGGGGC TGGATTATGA TTTACTGCGT AAGCTGAAAC GTAAAGGCTT TGCCGATGCG
CGTTTAGCCG ATGTATTAGG GGTGAATGAA GCTGAAGTGC GTAAGCTGCG TGATAAATTC
GACCTGCATC CTGTCTACAA ACGTGTAGAT ACCTGTGCGG CCGAGTTTGC GACTGACACG
GCCTATATGT ACTCGACCTA TGAGGAAGAG TGTGAAGCCA ATCCCTCTGA TCGTGAAAAA
ATCATGGTAT TAGGTGGTGG TCCAAACCGT ATCGGTCAAG GTATCGAATT CGACTATTGC
TGCGTACATG CGGCATTAGC ACTGCGTGAA GACGGTTACG AAACCATCAT GGTCAACTGT
AACCCTGAAA CCGTTTCGAC CGACTACGAC ACCTCAGATC GTCTGTACTT CGAGCCCGTC
ACTCTGGAAG ACGTATTAGA AATCGTCCGT ATCGAGAAGC CAAAAGGCGT TATCGTGCAG
TACGGTGGCC AAACACCACT GAAACTGGCT CGCGCCCTTG AGGCCGCTGG TGTGCCAATT
ATTGGTACTA GCCCAGATGC GATTGATCGC GCTGAAGACC GTGAGCGTTT CCAGCAGGCG
ATTCAACGCT TAGAGATGAA GCAACCTGAA AACGATACCG TGACCACAGT TGAAGGTGCA
GTGATTGCCG CTGAGCGTAT CGGTTATCCG CTGGTGGTGC GTCCATCCTA TGTTCTGGGT
GGCCGTGCGA TGGAAATCGT TTACGACCAA CAGGACTTAC TGCGCTACTT CAACGAAGCC
GTAAGCGTAT CTAACGCATC GCCAGTACTG TTAGACCACT TCTTAGATGA TGCGATCGAA
GTGGATATCG ACGCAGTCTG TGACGGTGAA ACTGTAGTTA TCGGCGCCAT CATGGAGCAT
ATCGAGCAAG CTGGGGTTCA CTCCGGTGAC TCAGGCTGTT CCTTACCGCC ATACACCTTA
AGCCAAGAAA TCCAAGATCG CATGCGCGTG CAAGTCGGCA AGTTAGCAAT GGAACTTGGT
GTCGTTGGCC TAATGAACGT ACAGTTTGCC GTGAAAGATA ACGAAATCTA TATGATTGAA
GTTAACCCAC GCGCAGCCCG TACTGTGCCA TTCGTGTCGA AAGCAACGGG CGTGCCTTTA
GCTAAGATCG CGGCGCGGGT GATGGCAGGG CAAAGCTTGA AGTCGCAAAA CTTCACTAAA
GAAGTGATCC CACCTTTCTA TTCAGTGAAA GAAGTGGTGT TGCCCTTTAA CAAGTTCCCA
GGTGTTGATC CACTGTTAGG CCCAGAAATG CGCTCTACTG GTGAAGTGAT GGGCGTGGGT
GATACCTTCG CCGAAGCTTA TGCTAAGGCG CAGTTAGGTG CCACAGCAGA GGTGCCTAAG
TCGGGCCGTG CATTATTGTC TGTGCGAAAC AGCGATAAGA AACGCGTTGC CGATTTAGCG
GCTAAGTTAA TCGAGCTGGG TTACCAAATC GATGCCACCC ACGGTACAGC CATTATTCTG
GGTGAAGCGG GCATTAACCC ACGTTTAGTG AACAAGGTAC ATGAAGGTCG TCCACACATT
CTCGATCGCA TCAAGAACGG TGAATACACT TATATCGTCA ACACCACTGA AGGTCGTCAA
GCGATTGAAG ACTCTCGTCA ATTGCGCCGC GGTGCACTGC GTTACAAAGT GAACTACACG
ACGACCATGA ATGCTGCATT TGCCACCTGT ATGGCCCATG CTGCTGATGA CCGTACCAAT
GTGACATCAG TGCAAGAATT GCATCAACGC GTATTAGCTG AATAA
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| Protein sequence | MPKRTDIKSI LILGAGPIVI GQACEFDYSG AQACKALREE GYRVILVNSN PATIMTDPEM
ADATYIEPIH WEVVRNIIAK ERPDAILPTM GGQTALNCAL ELEAKGVLAE FNVEMIGATA
DAIDKAEDRS RFDKAMKSIG LECPRAGIAH SMEEAYGVLE QVGFPCIIRP SFTMGGSGGG
IAYNKEEFEE ICSQGLDLSP TKELLIDESL IGWKEYEMEV VRDRNDNCII VCSIENFDPM
GVHTGDSITV APAQTLTDKE YQIMRNASMA VLREIGVETG GSNVQFGINP IDGRMVIIEM
NPRVSRSSAL ASKATGFPIA KIAAKLAVGF TLDELMNDIT GGRTPASFEP AIDYVVTKVP
RFNFEKFAGA NDRLTTQMKS VGEVMAIGRT FQESLQKALR GLEVSRNGLD PITDMSKPEA
MSRIRLELKE PGCDRIWYIA DAMRAGLGLD EIFRLTNIDP WFLVQIEELI KLEGVVAEAG
LAGLDYDLLR KLKRKGFADA RLADVLGVNE AEVRKLRDKF DLHPVYKRVD TCAAEFATDT
AYMYSTYEEE CEANPSDREK IMVLGGGPNR IGQGIEFDYC CVHAALALRE DGYETIMVNC
NPETVSTDYD TSDRLYFEPV TLEDVLEIVR IEKPKGVIVQ YGGQTPLKLA RALEAAGVPI
IGTSPDAIDR AEDRERFQQA IQRLEMKQPE NDTVTTVEGA VIAAERIGYP LVVRPSYVLG
GRAMEIVYDQ QDLLRYFNEA VSVSNASPVL LDHFLDDAIE VDIDAVCDGE TVVIGAIMEH
IEQAGVHSGD SGCSLPPYTL SQEIQDRMRV QVGKLAMELG VVGLMNVQFA VKDNEIYMIE
VNPRAARTVP FVSKATGVPL AKIAARVMAG QSLKSQNFTK EVIPPFYSVK EVVLPFNKFP
GVDPLLGPEM RSTGEVMGVG DTFAEAYAKA QLGATAEVPK SGRALLSVRN SDKKRVADLA
AKLIELGYQI DATHGTAIIL GEAGINPRLV NKVHEGRPHI LDRIKNGEYT YIVNTTEGRQ
AIEDSRQLRR GALRYKVNYT TTMNAAFATC MAHAADDRTN VTSVQELHQR VLAE
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