| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2929 |
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| Symbol | |
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| ID | 5078156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3396311 |
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| End bp | 3397207 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640500129 |
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| Product | 3'-5' exonuclease |
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| Protein accession | YP_001184443 |
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| Protein GI | 146294019 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0349] Ribonuclease D |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00209751 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTAA TGAAGTATTG CCTTTCGCCC AATAAGTTAG CTTGGCTACG TCAGGAGCTA
GGCGAGAATG CCGATGGTTT GATTGCAGTA ATGGATGCGG CGGGTAGCGC CTATTTGGCC
CAAGCTGCAC AGTCTGATGC TTCAGTTGCA ATAGATGCTT TGCCTAAATT AATAGGGCCT
GAACTTAAGT TATTGTGGTT TAAACAAAAG CTTGCGCTTA TCACTCGTCT TGATGATATT
GAGTTATCCA AATTAGCCCC TTTCGAGCTT GAGGGCGCGC GAGTGGTTGT GGTTCAGCCT
AATGAATTAA CAACAGTGCT GCAAAGCTTA AGCAAGCAGC GCGTCATTGG GTTTGATACC
GAAACTCGGG CAAGTTTTGA GCGCGGAGTG CAGCATCCCT TAAGTTTGAT CCAAATTGCG
ACCCATGACA CCTGCTATTT GTTTCAACAT GCGCTGTTAG CTGAGCGGTT AGGGTTATTA
AAACCTGTGC TTGAGGATGA GAATATTTTG AAAGTGGGTG TTGGCCTTAG AAGTGACGGT
CAAGCATTAA CGCGGGAGTG GGGGATTAAT GTCACGCCGA GGTTAGATTT GAACTGGGTT
CTTGCACAGC TTGGGGCGGG TAAAGAAATG GGTACTCGTC AACTGGTCGC CACGTTACTG
CAAAAGCGTA TCGATAAGCC TAAAAAAGTG ACCCTATCGA ATTGGCAACA GGTACCTCTA
ACCTCTACAC AAATTGTTTA TGCCGCCTTA GATGCATTGG CAGCGCAGCA TTGTTTTAGC
GAGTTAATCG ACAAACTTAA GCCATTTTAT CTGGCATCAT TAGAAGCGAA TACTCAGTTG
CTTACTCAAA ACCTCACGGT TCGACTGGCG AGCTATTTTG AACAGGCTAA TGGGTAA
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| Protein sequence | MKLMKYCLSP NKLAWLRQEL GENADGLIAV MDAAGSAYLA QAAQSDASVA IDALPKLIGP
ELKLLWFKQK LALITRLDDI ELSKLAPFEL EGARVVVVQP NELTTVLQSL SKQRVIGFDT
ETRASFERGV QHPLSLIQIA THDTCYLFQH ALLAERLGLL KPVLEDENIL KVGVGLRSDG
QALTREWGIN VTPRLDLNWV LAQLGAGKEM GTRQLVATLL QKRIDKPKKV TLSNWQQVPL
TSTQIVYAAL DALAAQHCFS ELIDKLKPFY LASLEANTQL LTQNLTVRLA SYFEQANG
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