| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2920 |
|---|
| Symbol | |
|---|
| ID | 5078146 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 3385240 |
|---|
| End bp | 3386826 |
|---|
| Gene Length | 1587 bp |
|---|
| Protein Length | 528 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640500121 |
|---|
| Product | von Willebrand factor, type A |
|---|
| Protein accession | YP_001184436 |
|---|
| Protein GI | 146294012 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2425] Uncharacterized protein containing a von Willebrand factor type A (vWA) domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.236566 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGTGAAC TTAAACCAAC AATGACGAAA CATAAAGTCG GTTTGTTGGC GCAGTTTGAC
CAGCAGTTTT CTGCCATTGA TTTATTACCG CAAGAGCTTG TGCCTGCTGT CGTTACTTTA
CCTGGCGGTG ATTTAACGAC TCGTTGTCAG TCTATCGCAT TGCTTCGTTC ACAACTGTTG
GCAGCAGAAG AGCTTTCTCT TCCATGCCCA TGGCTACCAG AGGTGACACA GCAGCAGATA
ATCACAACAG TAGAGGCTTC TGGAGTCGCG CGTTATTGTA AAGATAACCC ACAAGTGACT
GATGCCTTAA TTACTGATCT GCTGATTAAA CTTGAAGGAG CACAACTCCA GTCATTGGCA
CTATCACGAC AGTTGACGAT CATTGCAGAA AACGAAGCCC TAGAGCAATT ACGGCTTGAG
TTTGAAGCAA TTCAGAAAAA ACGCCGCTCT TCTAAAAAGC AAAAAGCTAT GGAGCTTAAT
GATGCTCAGT GCTTAGATAT TAGAATCCAA GCTGAGCTCA ATGCCTGGGT TCAGCTAGTA
AACAGTGCTG GTGGACAATT ATTTGAGCTT CCTGCTATCT GGTCTGAAAG GCTAGAAATA
TGGCAAGAAC TTGAAGAGGT TTTTACAGAT TTAGGCTTGT TGACAGGCCT TGGTTGGGAT
CTTTCTCAAG GGTTATTTCA AAGCCACGGC TGGATGAATT TAGTTAGGTT ACAAAAGATT
GTAAAACAGA TCCCACAATT GCGTGAAGTC ATTGAAACCC TTGGGAGTAT GAAAGATACC
GAGGGAGAGC CAATTATTGA AGAAATCATT TCACGCATGA GTGTGATCTT TAGGCATGAA
GTTGAAGTGA CCACTCCCTT AGTACCGATG GAAACCAAAG GTATCACTCG TTCAGACTCA
ATTAGTCGTA TGCTGCCACA AGAGGCTGCT TTTTTCGGCC ACCCAGTACT TAAAAAACTA
TGGCATGCGC GTAGGGCTGA GCATGCTTTG TTGAGTTATG CCGTTGAAGG TACTGAGCTA
ATAACTGAAG TTACCGAACA AGAGCAAGAG AACAAAGAAA ACAAAGCGGG CAACAAGGTC
AATCGAAACC GTGGCCCTAT GATAGTCTGC TTGGATACAT CTGGTTCCAT GCAAGGCACA
CCAGAGAATG TTGCTAAGGC ACTTGTGTTG CAGTGCATCA GTGTTGCAAA AAAAGAAAAA
CGAGCATGCT TTGTTTATTT GTTTGGCAGC AAAGGCGAAG TAAAGGAAAT GGAGCTCACA
CCAGATAAAG CTGGACTGGA ACAAATGATA CTCTTTTTAT CTATGTCATT CGGAGGCGGC
ACTGACGTTG AAGGTCCACT CAATATGGCG TTAGAAAGAA GTGATGAGAA GCAATGGCAG
CAGGCTGATA TTCTTTTGGT TAGCGATGGC GAGTTTTCTG TGTCATCAGG CTTATCTAGA
AAAATTAGTA ACCGTAAAGA GCAACGCGGG ATGAGCGTTC ATGGGGTTGT CATTGGAGGG
CGTTTGTCTC CTATGGATAA AATCTGTGAG CCTTTGCATC AGTTTTCAAG CTGGTTAGAT
CTTCAAAATA ATAAATATCA AATATAA
|
|---|
| Protein sequence | MSELKPTMTK HKVGLLAQFD QQFSAIDLLP QELVPAVVTL PGGDLTTRCQ SIALLRSQLL
AAEELSLPCP WLPEVTQQQI ITTVEASGVA RYCKDNPQVT DALITDLLIK LEGAQLQSLA
LSRQLTIIAE NEALEQLRLE FEAIQKKRRS SKKQKAMELN DAQCLDIRIQ AELNAWVQLV
NSAGGQLFEL PAIWSERLEI WQELEEVFTD LGLLTGLGWD LSQGLFQSHG WMNLVRLQKI
VKQIPQLREV IETLGSMKDT EGEPIIEEII SRMSVIFRHE VEVTTPLVPM ETKGITRSDS
ISRMLPQEAA FFGHPVLKKL WHARRAEHAL LSYAVEGTEL ITEVTEQEQE NKENKAGNKV
NRNRGPMIVC LDTSGSMQGT PENVAKALVL QCISVAKKEK RACFVYLFGS KGEVKEMELT
PDKAGLEQMI LFLSMSFGGG TDVEGPLNMA LERSDEKQWQ QADILLVSDG EFSVSSGLSR
KISNRKEQRG MSVHGVVIGG RLSPMDKICE PLHQFSSWLD LQNNKYQI
|
|---|
| |