Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2876 |
Symbol | |
ID | 5078623 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 3337783 |
End bp | 3338748 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640500079 |
Product | lipoyl synthase |
Protein accession | YP_001184394 |
Protein GI | 146293970 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0320] Lipoate synthase |
TIGRFAM ID | [TIGR00510] lipoate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0754529 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAGGC CAGAACGTTT ACAGCCCGGA GTCAAATTAA GGGATGCCGA TAAAGTATCT CGTATTCCGG TTAAGATTGT GCCCTCCGAG CGCGATACTA TGTTACGTAA ACCCGATTGG TTACGGGTAA AACTCCCCGC TTCTAATCAA CGTATCTTAG ATATTAAACA AGCCCTACGT AGCAATGGCT TGCATTCTGT ATGCGAAGAA GCATCCTGCC CTAACCTCGC GGAATGCTTC AACCACGGTA CAGCGACCTT TATGATTCTG GGTGCAATTT GTACTCGTCG TTGCCCATTC TGTGATGTTG CCCATGGCCG CCCTTTAAAA CCCGACGCCG AAGAGCCAGT TAAATTGGCA CAAACGATCC GCGATATGAA GCTTAAATAC GTGGTTATCA CCTCGGTAGA TCGTGATGAT TTACGTGATG GTGGGGCGCA GCATTTTGCC GATTGTATTC GAGAAATCCG CAAACTGAAC CCTGCGATTA AGATTGAAAT CCTCGTACCG GATTTCCGTG GACGCATCGA TGCAGCATTA GATATTTTAG CAACTGAGCC GCCTGATGTG TTTAACCACA ACTTAGAAAC AGCGCCAATG CATTATCGCA AAGCCAGACC CGGTGCTAAC TACCAGTGGT CACTCGATTT GCTAAAACGC TTTAAAGAAC GTCATCCAAA CGTGCCAACA AAATCTGGCC TGATGATGGG ACTGGGTGAA ACCAACGAAG AGATCGCGCA AGTACTGCGC GACTTACGCG AACATAAAGT TGAAATGCTG ACCTTAGGCC AATACCTGCA GCCGTCTAAA TTCCACCTGC CGGTTGAACG CTATGTACCG CCAGCAGAGT TTGATGAACT TAAAGCCTTA GCCGATGAAT TAGGTTTTAC CCATGCAGCC TGTGGCCCAT TAGTGCGTTC AAGCTACCAT GCGGATCTGC AAGCACAAGG TAAAGAAGTT AAATAA
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Protein sequence | MNRPERLQPG VKLRDADKVS RIPVKIVPSE RDTMLRKPDW LRVKLPASNQ RILDIKQALR SNGLHSVCEE ASCPNLAECF NHGTATFMIL GAICTRRCPF CDVAHGRPLK PDAEEPVKLA QTIRDMKLKY VVITSVDRDD LRDGGAQHFA DCIREIRKLN PAIKIEILVP DFRGRIDAAL DILATEPPDV FNHNLETAPM HYRKARPGAN YQWSLDLLKR FKERHPNVPT KSGLMMGLGE TNEEIAQVLR DLREHKVEML TLGQYLQPSK FHLPVERYVP PAEFDELKAL ADELGFTHAA CGPLVRSSYH ADLQAQGKEV K
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