Gene Sputcn32_2852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2852 
Symbol 
ID5078693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand- 
Start bp3313398 
End bp3314489 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content46% 
IMG OID640500055 
ProductGTP-dependent nucleic acid-binding protein EngD 
Protein accessionYP_001184370 
Protein GI146293946 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0012] Predicted GTPase, probable translation factor 
TIGRFAM ID[TIGR00092] GTP-binding protein YchF 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.0000000959871 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTTTTA AATGCGGCAT TGTTGGTCTT CCTAACGTAG GCAAATCAAC GCTTTTTAAT 
GCGTTAACTA AGGCTGGCAT CGAAGCGGCT AACTTCCCGT TTTGTACTAT TGAACCTAAC 
ACGGGTGTGG TACCTGTGCC AGATCCACGT TTGGATGCGT TAGCTGCAAT TGTCAATCCC 
CAACGTGTAT TGCCAACAAC GATGGAGTTT GTGGATATCG CAGGCTTAGT TGCTGGCGCA 
TCTAAAGGCG AAGGTTTAGG TAACAAGTTC TTAGCTAACA TCCGTGAAAC CGATGCAATC 
GGTCATGTTG TGCGCTGTTT TGATGATGAC AACATTGTTC ACGTGGCCAA TAAGGTTGAT 
CCTGCGGGCG ATATTGAAGT GATTAACACT GAATTAGCCT TGGCTGACTT AGACAGTTTA 
GAGCGTGCCG TTCTGCGTCA GCAAAAACGG GCTAAAGGTG GCGATAAAGA CGCTAAGTTT 
GAAGTGGAAG TATTAGAAAA AATGCGTCCA GTGCTCGATG AAGCCAAAAT GTTGCGTTCA 
ATGGATTTAT CAAAAGAAGA ATTGGAAGCC GTTGCTTACC TTAACTTCTT AACCTTAAAA 
CCGACAATGT ACATTGCCAA CGTGGCGGAA GATGGTTTTG AAAATAACCC GCATTTAGAT 
GCAGTTCGCG CCATTGCTGC GACAGAAAAC GCCATTGTTG TTGCCGTGTG TGCGGCGATT 
GAATCTGAAC TGGCTGAGAT GGAAATCGAG GAGCGCGATG AGTTTATGGC CGATCTTGGG 
TTAGAAGAGC CAGGTTTAGA TCGCGTTATT CGTGCGGGAT ACCAGTTACT TAATCTGCAA 
ACGTACTTTA CTGCTGGCGT AAAAGAGGTT CGCGCTTGGA CTATTCCTGT AGGAGCGAGT 
GCTCCACAAG CTGCGGGCGT TATTCATACT GACTTTGAAC GTGGCTTTAT TCGTGCGCAG 
GTGATGGCGT TTGAAGACTT CATTACCTAC AAAGGGGAAG CTGGTGCCAA AGAAGCGGGC 
AAACTACGCG TTGAAGGTAA AACTTATATC GTGAAAGATG GCGATGTTAT GCATTTCTTG 
TTTAACGTAT AA
 
Protein sequence
MGFKCGIVGL PNVGKSTLFN ALTKAGIEAA NFPFCTIEPN TGVVPVPDPR LDALAAIVNP 
QRVLPTTMEF VDIAGLVAGA SKGEGLGNKF LANIRETDAI GHVVRCFDDD NIVHVANKVD 
PAGDIEVINT ELALADLDSL ERAVLRQQKR AKGGDKDAKF EVEVLEKMRP VLDEAKMLRS 
MDLSKEELEA VAYLNFLTLK PTMYIANVAE DGFENNPHLD AVRAIAATEN AIVVAVCAAI 
ESELAEMEIE ERDEFMADLG LEEPGLDRVI RAGYQLLNLQ TYFTAGVKEV RAWTIPVGAS 
APQAAGVIHT DFERGFIRAQ VMAFEDFITY KGEAGAKEAG KLRVEGKTYI VKDGDVMHFL 
FNV