| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2842 |
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| Symbol | rrmJ |
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| ID | 5078676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3303365 |
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| End bp | 3303994 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640500038 |
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| Product | 23S rRNA methyltransferase J |
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| Protein accession | YP_001184360 |
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| Protein GI | 146293936 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0293] 23S rRNA methylase |
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| TIGRFAM ID | [TIGR00438] cell division protein FtsJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000146393 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCAGGTA AAAAACGTAC GGCCAGTTCC AATCGCTGGA TGCTGGAACA CTTTGATGAT
CATTATGTCA AACTAGCACA GAAACGGGGA TTGCGTTCTC GCGCTGCGTT TAAGCTTGAA
GAACTTCAGC AAAAGGATCA ACTTATTCGC CCTGGTATGA CGGTAGTCGA CCTGGGAGCA
GCACCAGGTG GCTGGTCACA GGTAGCGGTT AAGTTGGTTG GAGATAGGGG AAAGGTTATC
GCCTGTGATA TTTTACCCAT GGATCCCATC GTTGGGGTAG ACTTTTTGCA AGGGGATTTT
CGTGAAGAAA AAGTCCTTGA AGCATTGCTT ACCCGCGTCG GTGCAGATAA GGTTGACGTT
GTGTTGTCAG ACATGGCGCC TAACATGAGT GGTTCAGACG GTGTCGATCA ACCGCGTGCT
ATGTATTTAG TGGAACTCGC CTTAGATATG TGTCATCAAG TATTGGCACC TAATGGGAGT
TTTGCGGTGA AAGTCTTTCA GGGGGAGGGC TTTGACGAAT ACATGAAAGC GGTTAAAGAA
GCGTTTAAAG TAGTTAAAAC ACGTAAACCG GACTCTTCGC GGGCGCGTTC CCGGGAAGTC
TATCTTGTGG CGACAGGGTA CAAGTTGTAG
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| Protein sequence | MSGKKRTASS NRWMLEHFDD HYVKLAQKRG LRSRAAFKLE ELQQKDQLIR PGMTVVDLGA
APGGWSQVAV KLVGDRGKVI ACDILPMDPI VGVDFLQGDF REEKVLEALL TRVGADKVDV
VLSDMAPNMS GSDGVDQPRA MYLVELALDM CHQVLAPNGS FAVKVFQGEG FDEYMKAVKE
AFKVVKTRKP DSSRARSREV YLVATGYKL
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