Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2838 |
Symbol | |
ID | 5078672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 3297922 |
End bp | 3298704 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640500034 |
Product | triosephosphate isomerase |
Protein accession | YP_001184356 |
Protein GI | 146293932 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0149] Triosephosphate isomerase |
TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000084878 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACTCA GACGTCCTAT GGTAGCTGGC AATTGGAAGA TGAACGGCAG TGCAGCATTA GCACAAGAGT TGTTCAAAAA ATTTGCCTCT AAGCTCCAAA ATGATTCAGC TGAAGTGGTT TTATGCCCGC CTTCTATCTA TCTAGAGAGC GTTAGGCAAC TGCTAGAAGC AAACAAGGAA GCGTTAGACG GTTCACTTGT TAGGATGGGC GCACAAAACC TAAGTCAACA CGACTTTGGC GCTTATACCG GAGAAGTTTC AGGTCAGATG CTAAAAGATT CAGGATGTCG ATATGTGATT ATCGGACATT CAGAACGTCG CCGTATGTAC GGAGAGACGA GTAATATTGT AGCGGAGAAA TTCGCCGCTG CACAAAAGCA CGGCTTAACC CCAATATTGT GTGTGGGAGA GTCAGGTCCA GCGCGTGAAG CAAGACGTAC CTTCGAGGTA ATTGCGGAAG AGTTGGATAT AGTGATCCAG AAAAATGGCA CTATGGCTTT TGATAACGCC ATTATCGCCT ACGAGCCACT ATGGGCTGTA GGGACAGGTA AAAGCGCTAC ACCAGAGCAG GCACAAGAAG TTCATGCGTT TATTCGCAAA CGTCTCTCTG AGGTATCTCC ATTTATCGGA GAAAATATCA GGATTCTCTA CGGTGGTAGT GTGACGCCGA GTAATGCTGC AGATTTATTT GCCCAACCTG ATGTTGATGG TGGACTGATT GGCGGTGCTA GCTTAAACTC TAGCGAGTTT TTAAGTCTGT GTACCATAGC GATGAGCGCA TAA
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Protein sequence | MALRRPMVAG NWKMNGSAAL AQELFKKFAS KLQNDSAEVV LCPPSIYLES VRQLLEANKE ALDGSLVRMG AQNLSQHDFG AYTGEVSGQM LKDSGCRYVI IGHSERRRMY GETSNIVAEK FAAAQKHGLT PILCVGESGP AREARRTFEV IAEELDIVIQ KNGTMAFDNA IIAYEPLWAV GTGKSATPEQ AQEVHAFIRK RLSEVSPFIG ENIRILYGGS VTPSNAADLF AQPDVDGGLI GGASLNSSEF LSLCTIAMSA
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