Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2835 |
Symbol | nusA |
ID | 5078667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 3295169 |
End bp | 3296668 |
Gene Length | 1500 bp |
Protein Length | 499 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640500029 |
Product | transcription elongation factor NusA |
Protein accession | YP_001184353 |
Protein GI | 146293929 |
COG category | [K] Transcription |
COG ID | [COG0195] Transcription elongation factor |
TIGRFAM ID | [TIGR01953] transcription termination factor NusA [TIGR01954] transcription termination factor NusA, C-terminal duplication |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0457826 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAG AGATCCTGCT AGTCGCTGAA GCGGTTTCAA ATGAAAAGGC CGTTCCACGC GAGAAAATTT TTGAAGCGCT AGAGATCGCT CTGGCTACTG CAACCAAGAA AAAATACGAT GGCGATATTG ATGTCCGCGT TGCGATTGAC CGCAAAACGG GTGGCTATGA GACATTCCGC CGTTGGATGG TCGTTGATGA TCACGGTGAA GCCTTAGAAA ACCCATTTCG CGAGATTACG CTTGAGGCGG CTCGTTATGA AAATCCGGAT ATTCAACCGG GTGAGTTTAT CGAAGACGAT ATCGAGTCTG TTGTATTTGA CCGCATTACG ACTCAAACCG CCAAACAAGT GATCGTACAA AAGGTACGTG AAGCTGAACG TGCTCAAGTG GTTGAGCAGT TCAGAGATAA AGAAGGCGAA CTGATCACTG GCGTTGTGAA AAAAGCAACC CGTGAAAGTG TCGTGGTCGA TTTAGGCAAT AATGCTGATG GCGTGCTGTT CCGTGAAGAT TTAATTTCAC GCGAATCTTT CCGCCCTGGT GACCGTGTGC GTGCATTATT GTACTCAGTA CGTCCAGAAG CTCGCGGTGC ACAATTATTC CTAAGCCGTA CTAAACCCGA AATGCTGATT GAGCTTTTCC GTGTTGAAGT ACCTGAAATC GCTGATGAAT TGATCGAAGT CATGGGCGCA GCCCGTGATC CAGGCGCACG CGCTAAGATC GCGGTTAAGT CGAATGATCG CCGTATCGAT CCTATCGGTG CGTGTGTTGG CATGCGCGGC GCACGTGTAC AAGCAGTATC AAATGAACTG GGTGGCGAGC GTGTTGATAT CGTATTGTGG GATGATAATC CAGCACAATA TGTGATCAAT GCCATGGCGC CAGCTGATGT AGCTTCTATC ATCGTCGACG AAGATAACCA TTCAATGGAT ATCGCGGTTG AGGCTGATAG TTTGGCACAA GCCATTGGAC GTAATGGCCA GAACGTACGT TTAGCAACTC AACTTACGGG TTGGGAACTG AACGTAATGA CAGTGGAAGA CATGAATAAG AAACATCAGG CTGAAAGTGC CAAAGTGGTG AGTCTGTTTA TTAATTCACT GGATGTCGAT GAAGATTTTG CACAAGTACT AGCGAATGAG GGCTTTACGT CGCTTGAAGA GGTCGCTTAT GTACCTGTGT CTGAATTATT GGCGATAGAC GGTTTCGACG AGGATCTCGT TGAAGCTTTA CGTGAACGTG CAAAAGCTGC GATCTCGACA AGAGCGCTCG CATCTGAAGA AGCACTGGAT GGTGTGGAGC CAAGTGATGA GTTGTTAGCA CTTGAAGGTG TTGAAAGACA CTTAGCCTAT GTTTTAGCAA GCAAAGGTAT TGTGACTCTA GAAGACTTGG CTGAACAAGG CATTGATGAT TTGATCGAAA TTGAAGAATT GACAGAAGAA AAAGCAGGTA CGCTCATCAT GGCTGCCCGC AACATCTGTT GGTTTGGCGA AGAAGCATAA
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Protein sequence | MNKEILLVAE AVSNEKAVPR EKIFEALEIA LATATKKKYD GDIDVRVAID RKTGGYETFR RWMVVDDHGE ALENPFREIT LEAARYENPD IQPGEFIEDD IESVVFDRIT TQTAKQVIVQ KVREAERAQV VEQFRDKEGE LITGVVKKAT RESVVVDLGN NADGVLFRED LISRESFRPG DRVRALLYSV RPEARGAQLF LSRTKPEMLI ELFRVEVPEI ADELIEVMGA ARDPGARAKI AVKSNDRRID PIGACVGMRG ARVQAVSNEL GGERVDIVLW DDNPAQYVIN AMAPADVASI IVDEDNHSMD IAVEADSLAQ AIGRNGQNVR LATQLTGWEL NVMTVEDMNK KHQAESAKVV SLFINSLDVD EDFAQVLANE GFTSLEEVAY VPVSELLAID GFDEDLVEAL RERAKAAIST RALASEEALD GVEPSDELLA LEGVERHLAY VLASKGIVTL EDLAEQGIDD LIEIEELTEE KAGTLIMAAR NICWFGEEA
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