| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2829 |
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| Symbol | |
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| ID | 5078661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3286214 |
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| End bp | 3288313 |
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| Gene Length | 2100 bp |
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| Protein Length | 699 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640500023 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_001184347 |
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| Protein GI | 146293923 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000362505 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATCCAA TTGTAAAGAG TTTTGAGTAT GGTCAACATA CAGTCACCCT GGAAACAGGC
GTTATAGCGC GTCAAGCTGA TGCCGCTGTG TTAGCAAGTA TGGGTGACAC AACAGTGTTA
GTCACTGTTG TTGGTAAAAA AGAAGCCGAA GCCGGTCGTG ATTTTTTCCC TCTGACTGTT
AACTATCAAG AAAAAACCTA CGCAGCAGGT AAAATTCCTG GCGGTTTCTT TAAGCGTGAG
GGTCGTCCTT CAGAAGATGA GACATTAATT GCTCGTCTTA TTGACCGCCC AATTCGTCCT
CTTTTCCCTA ATGGTTTCAA AAACGAAGTT CAAGTTATCA TCACAGTTGT ATCTGTCGAC
CCACAAATTG AGCCAGATAT CATCTCTATG ATCGGTACTT CTGCTGCATT GGCCATTTCT
GGTATCCCGT TTAGCGGTCC TTTGGGCGCT GCTCGTGTCG GTTATATCAA TGGTGAATAT
GTATTGAACC CAACAGTGGC TCAAATTGAA ACGAGCCAAT TGAACTTAGT GGTTGCTGGT
ACAGCAAGTG CAGTGTTAAT GGTGGAATCA GAAGCCCAAG CATTACCAGA AGAAGTGATG
TTAGGTTCTG TTGTTTATGG TCACGATCAA CAACAAGTGG TTATTAACGC GATTGCTGAG
TTTAAAGCTG AAGCGGGTAA ACCAATGTGG GATTGGACTG CGCCAGTGCA AGATGAAACG
CTTGTTGCTC AAATTAAAGA GTTGGCTGAA GCGGGTTTAG GCGATGCGTA TAAAATCCAA
GTTAAGCAAG ACCGTTATGC TCAAGTTGCT GTAGTTAAAG CTGCAACGAA AGAAGCGTTA
TTAGCAAGCA ATCCAAATAT TGATTTACGT GAAGTAGACA ATTTACTGGG CAGCTTAGAG
AAGAAAGTCG TTCGTGGTCG TATTATTCGT GGCGAGCCGC GTATCGATGG TCGTGAACCC
GATATGATCC GTGCGTTAAG TGTATTAGCG GGAGTATTGC CACGTACTCA CGGTAGCGCC
TTGTTCACTC GCGGCGAAAC CCAAGCCTTA GTAACTTGTA CTTTAGGTAC TGAACGTGAT
GCACAGAAGA TCGATAGCAT CATGGGTGAG CGCACTAATC GTTTTATGTT GCACTATAAC
TTCCCTCCTT ACTCTGTTGG TGAAACCGGT ATGGTGGGTT CACCTAAGCG CCGCGAAATC
GGTCATGGAA AGTTAGCATG GCGTGGTATT AACGCTGTGA TGCCATCGGC AGAAGAATTT
CCATACAGCG TGCGCGTTGT ATCTGAAATT ACTGAATCTA ATGGTTCAAG TTCTATGGCG
TCTGTCTGTG GTACTTCCCT TGCGCTGATG GATGCGGGTG TACCTATCAA GACTTCTGTA
GCAGGTATTG CTATGGGTCT TGTAAAAGAA GGCGATGATT TTGTCGTACT TTCAGACATC
TTAGGTGATG AAGATCATTT AGGTGATATG GACTTTAAAG TGGCGGGTAC CCGTGGTGGT
ATTACTGCAC TGCAAATGGA TATCAAGATC GAAGGTATCA CCAAAGAAAT TATGGAAATT
GCACTACAAC AAGCCTATGG CGCACGTGTG CATATTCTAA ATGTGATGGA TCAAGCGATT
GGTTCGCACC GTGATGATAT TTCTGATCAT GCTCCACGTA TCACTACAAT CAAAATTAAC
CCAGAGAAAA TCCGTGATGT TATCGGTAAA GGTGGCGCAG TTATTCGTGC TCTGACCGAA
GAAACTGGCA CTACGATTGA GCTGGAAGAT GATGGTACGG TAAGAATTGC CTCTTCAAAT
GGTGAAGCGA CCAAAGAAGC TATCCGCCGT ATTGAAGAAA TCACTTCAGA AGTCGAAGTG
GGCCGTATCT ATAATGGTAA AGTGATCCGT ATCGTTGATT TCGGTGCATT TGTGAACATT
CTGCCGGGCA AAGATGGTTT AGTACACATT TCACAAATCA GTGATGAACG TGTGGCTAAC
GTGTCTGATC ACCTTGAACT TAACCAAGAA GTTGCTGTTA AGGTAATGGA AGTGGATCGT
CAAGGTCGTG TACGCTTATC AATCAAAGAA GCACAAACGA AAGAAGCTGC AGCAGAATAA
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| Protein sequence | MNPIVKSFEY GQHTVTLETG VIARQADAAV LASMGDTTVL VTVVGKKEAE AGRDFFPLTV
NYQEKTYAAG KIPGGFFKRE GRPSEDETLI ARLIDRPIRP LFPNGFKNEV QVIITVVSVD
PQIEPDIISM IGTSAALAIS GIPFSGPLGA ARVGYINGEY VLNPTVAQIE TSQLNLVVAG
TASAVLMVES EAQALPEEVM LGSVVYGHDQ QQVVINAIAE FKAEAGKPMW DWTAPVQDET
LVAQIKELAE AGLGDAYKIQ VKQDRYAQVA VVKAATKEAL LASNPNIDLR EVDNLLGSLE
KKVVRGRIIR GEPRIDGREP DMIRALSVLA GVLPRTHGSA LFTRGETQAL VTCTLGTERD
AQKIDSIMGE RTNRFMLHYN FPPYSVGETG MVGSPKRREI GHGKLAWRGI NAVMPSAEEF
PYSVRVVSEI TESNGSSSMA SVCGTSLALM DAGVPIKTSV AGIAMGLVKE GDDFVVLSDI
LGDEDHLGDM DFKVAGTRGG ITALQMDIKI EGITKEIMEI ALQQAYGARV HILNVMDQAI
GSHRDDISDH APRITTIKIN PEKIRDVIGK GGAVIRALTE ETGTTIELED DGTVRIASSN
GEATKEAIRR IEEITSEVEV GRIYNGKVIR IVDFGAFVNI LPGKDGLVHI SQISDERVAN
VSDHLELNQE VAVKVMEVDR QGRVRLSIKE AQTKEAAAE
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