Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2806 |
Symbol | |
ID | 5080779 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 3257503 |
End bp | 3258378 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640500000 |
Product | peptidase U32 |
Protein accession | YP_001184324 |
Protein GI | 146293900 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0826] Collagenase and related proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTATTT CCCTAGGACC ATTAGTGTAT TGCTGGCAAA AACAACAGGT CATGGCCTTT TACCAACAAG TTGCAGCCAG CCAAATTCCG CTCGTCTATT TAGGAGAAGC TGTCTGTAGC CGCAGACGCG AACTCAAATG GGGGGATTAT TTTGAGCTTG CGCGAATGCT CAAGCAGGCT GGTAAAGAAG TGGTGATTTC AACACTGGCA TTAATTGAAG CGTCATCGGA ATATACCGAG CTTAAGCGTC AAGTCGATAA TGGCGAATTT ATGATAGAAG CTAATGACAT GGCTGCAGTC TACCTCGCCA AAGAACACAA ATTACCCTTT GTCTGCGGTG CGAGTATCAA CAACTATAAC CGAGCTAGCC TAGATATTTT ACATGGCTTT GGTATGCAGC GATTTGTTAT GCCAGTGGAA TTATCTAAGG CTTGGCTACA GCATGTTATA CAAAATAAAC CCGCTTTTGA GGTAGAAGTT TTTGGCCATG GCTATTTACC TCTGGCTCAT TCAGCGCGCT GTTTTACTGC AAGACACAAA CAACTCACTA AAGACAGTTG TGAAACAATT TGCCGCCAAT ATAGCAAGGG GCTGCTCGCT CAAACCCAAG AGATGCAGCC GCTATTAAGG CTTAATGGTA TTCAAACCCA ATCTGCAGCT TGTTTAGATT TAAGCAGTGA AATCGCAGCA ATGAATACAA TGGGAGTGGA TGTATTTAGA GTCTCACCTA GCGGTACAGA ATCGATCGTG CGAGCCGAAA GTTTAATCGA AGCCCTTAAC ATGCCTGAAA TGGCACTCAA TGCTCCTATA AAGGGTGAAC AATGTGATGG TTATTGGTTT GGTGAAGCTG GCCTGACTAT TCATCACGCA ACCTAG
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Protein sequence | MRISLGPLVY CWQKQQVMAF YQQVAASQIP LVYLGEAVCS RRRELKWGDY FELARMLKQA GKEVVISTLA LIEASSEYTE LKRQVDNGEF MIEANDMAAV YLAKEHKLPF VCGASINNYN RASLDILHGF GMQRFVMPVE LSKAWLQHVI QNKPAFEVEV FGHGYLPLAH SARCFTARHK QLTKDSCETI CRQYSKGLLA QTQEMQPLLR LNGIQTQSAA CLDLSSEIAA MNTMGVDVFR VSPSGTESIV RAESLIEALN MPEMALNAPI KGEQCDGYWF GEAGLTIHHA T
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