| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2800 |
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| Symbol | |
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| ID | 5080773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3251391 |
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| End bp | 3252887 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640499994 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001184318 |
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| Protein GI | 146293894 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAGGA TGGAATTTAT CGCTATAGCA TTGCTTATTA TCCTGATAGG CGTGCTATAT
ATTCTGCTGG CAAAATATCA CTCGCAACGT CTGCAACAAC GGTTTTTGGC TCAACTATGT
TGTCAACTCG ATCAGCAAAA GATTGAGCGT CGGCCCCTTA ACATTTCTGC GGTTCCCCAA
GAGTTTGCAC CGCTTTATGA TTCCTTAAAT GAGATGCTAA CCGCTCTGCC TGCGGGAATG
GGTAAAGATA AGCTTACTGG GCTGAGTAAT CGAGTGGGCC TAAAACGTAC TTTAGCCACT
ATGATGCCGC TTACTCGAGG GACTATGGTT TTAGTTGATA TTTATCGCTT TCGCTATGTA
AATGATCTCT TTGGCTTTGT CTTTGGTGAC ATTTTACTCA AGCAGTTTGC TGAGCGTTTA
CACTCCCTAA GCCTTAATCC TAGATTCATT GCTCGTTTAA ACGGTGATGA ATTTTTTCTT
TACTATGACC AAAACCTGAC GGAAGAACAA TTACTGCATT TACGTGGTCG TTTACAAGTG
CCTTTTCGTA TCAATGATAC GCCAGTGAGT GTTCGTGTGC AGATAGGATG TTTGCAGCTT
CAATCACATC ATGCTGATGC AAGCCAAATG TTACGAAGGC TGGATCTTGC CCTTAAAAAA
GCGCGTATAA CACGCAGTGC TATTGCCTGT TACAGTGAGA ATGATGATAT AAGGCAACTG
CGAGAACTCA AAATTATTGA TAGTCTTCCT AAAGGGTTAC AGCAAAATCA TTTATATATG
GTGTACCAAC CTAAGCAAAA TATACAAACG GGGTTATGTA CCCAAGTCGA AGCCTTAATA
CGTTGGCAGC ATGAGGAGCT TGGGACTATT TCTCCTGGAG AGTTTATTCC TCTGGCTGAA
TATGCCGGAA TGATTGACTT GGTGAGTCAA TGGGCCCTTG AACAGGTTTT AGCTCAACAG
GCAAAATGGC GTACCGCGGG GATTAATTTA TGTGTAGCGG TTAACCTTTC TACACGGGAT
CTAGACAGTG AAACCTTACC CCAAGAAATT GCATCGCGCC TTGCTTATTA TCATTTACCT
CCCGAATCTT TAATGATTGA AATTACGGAA AGTACGCTGA TGGCTGACTT AAATAAAGCC
GTAGAAACCC TAGATAAAAT TCGTGCGTTA GGGGTTAGTC TCGCGATTGA TGATTTTGGT
ACGGGCCATT CTTCTTTGGC TTATTTAAAG CATTTGCCCG TCAATGAAGT CAAAATTGAT
AAAGCCTTTT TACAGGATCT TGAACGGGAT AAGGCATCTG AATATATCCT CGAAGCCAGT
ATCAATATCG CCAAAAAATT AGGTTATCAA GTGACTGTCG AAGGTATTGA AACGCTCGAG
ATTAGGGATA GGTTAGTGGC GATGGGCGTT GATACCCTGC AAGGTTTATA TTACGCAAAG
CCTATGAGTG CTGCTGAGCT TGAAATGAAC TGGGCACAGT TGCATTATGC GACGTAA
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| Protein sequence | MIRMEFIAIA LLIILIGVLY ILLAKYHSQR LQQRFLAQLC CQLDQQKIER RPLNISAVPQ
EFAPLYDSLN EMLTALPAGM GKDKLTGLSN RVGLKRTLAT MMPLTRGTMV LVDIYRFRYV
NDLFGFVFGD ILLKQFAERL HSLSLNPRFI ARLNGDEFFL YYDQNLTEEQ LLHLRGRLQV
PFRINDTPVS VRVQIGCLQL QSHHADASQM LRRLDLALKK ARITRSAIAC YSENDDIRQL
RELKIIDSLP KGLQQNHLYM VYQPKQNIQT GLCTQVEALI RWQHEELGTI SPGEFIPLAE
YAGMIDLVSQ WALEQVLAQQ AKWRTAGINL CVAVNLSTRD LDSETLPQEI ASRLAYYHLP
PESLMIEITE STLMADLNKA VETLDKIRAL GVSLAIDDFG TGHSSLAYLK HLPVNEVKID
KAFLQDLERD KASEYILEAS INIAKKLGYQ VTVEGIETLE IRDRLVAMGV DTLQGLYYAK
PMSAAELEMN WAQLHYAT
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