| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2792 |
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| Symbol | |
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| ID | 5080765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3243393 |
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| End bp | 3244631 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640499986 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001184310 |
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| Protein GI | 146293886 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAGTA ACAAACCTTT ACGAATAATG ATGTTAACGG CGGTGGCGGC TTTCGTCCTT
TCAGCTTGTG GTGAGCAAAC AACGCAGCAG GGGCCTGCAC CGACTGCACC TAAGGTGGAT
GTTGCTCAAG TATTGCATGA GCGAGTTACC GAATGGGATG AGTTTACTGG CCGTTTACAG
GCACCAGAAA GTGTCACCCT TATCCCACGA GTATCTGGTT ACATTGAATC AGTAAATTTT
AAAGAAGGCG CCTTAGTGAA GAAAGGTGAC GTACTCTTTC GCATCGATCC AAGCGTGTTT
GAAGTGGAAG TGGCCCGGTT AAAAGCGGAT CTTGCTAGCG CTATTTCTGC TGAGCAACTG
GCCACTAATG ATTTGGAGCG TGCCCGTAAG TTGTTTGATC AAAAGGCAGT TTCTGCAGAA
TTACTCGATA CCCGTGAGTC AAACAAGCGC CAAACTGCGG CGGCGGTTGC GTCGGTGAAA
GCAGCACTCA TGCGCGCCGA GCTTGATTTA GCTTATACCC AAGTGCAAGC GCCGATTGAT
GGCCGCGTGT CCTACGCCAA CGTCACAACG GGTAACTATG TCACTGCAGG GCAGAGTGTG
CTAACCAGCT TGGTTTCTAC GGCCAGCATG TATGCCTATT TCGATGTGGA TGAACAAACC
TACCTTAAAT ACGTAAAGCT AACAGCCGAG AAGAAACGTA ACGATCCTCG TGCTGGTGAT
AACCCCGTGT ATATGGCTTT AGCCAATGAG CGCGATTATC ACCATATTGG CATGGTCGAC
TTTGTTGACA ATGCGATGGA TAAGCAGACG GGCACAATTC GAGTTAGAGC CACTTTTGAC
AATGAAGACA ATAGATTATT GCCTGGCTTG TTTGCGCGTC TTCGCACCGC GGGCAGCGGC
GCCTATGAGG GGATCTTGAT CGACGATAAA GCCGTTGGCA CAGATCTCAA TAATAAGTTT
GTGCTGGTCG TCGGTGATGA TGGCACGGTC GAATATCGTG GCGTGACCTT AGGTGAGAAA
GTTCAAGGGC TTCGTATCGT AACTCAAGGT TTAGCTGCTG AAGACAAGAT CGTCGTCAAC
GGTATGCAGC GTGTTCGCCC TAAGATGCAA ATTGAGCCAA ATATGGTGGA TATGGTCGAC
AGCGAGAAAC TCGAAGCATT GCGCCAAGCC CAGTTAATGC TCGATAAAAA CCAAGATCAT
TTGACGGCGC AAGCGGTTGA AACGGCGAGC CGCGGTTAA
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| Protein sequence | MMSNKPLRIM MLTAVAAFVL SACGEQTTQQ GPAPTAPKVD VAQVLHERVT EWDEFTGRLQ
APESVTLIPR VSGYIESVNF KEGALVKKGD VLFRIDPSVF EVEVARLKAD LASAISAEQL
ATNDLERARK LFDQKAVSAE LLDTRESNKR QTAAAVASVK AALMRAELDL AYTQVQAPID
GRVSYANVTT GNYVTAGQSV LTSLVSTASM YAYFDVDEQT YLKYVKLTAE KKRNDPRAGD
NPVYMALANE RDYHHIGMVD FVDNAMDKQT GTIRVRATFD NEDNRLLPGL FARLRTAGSG
AYEGILIDDK AVGTDLNNKF VLVVGDDGTV EYRGVTLGEK VQGLRIVTQG LAAEDKIVVN
GMQRVRPKMQ IEPNMVDMVD SEKLEALRQA QLMLDKNQDH LTAQAVETAS RG
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