Gene Sputcn32_2754 details

Gene Information

• Locus tag: Sputcn32_2754
• Symbol: ispF
• ID: 5080821
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella putrefaciens CN-32
• Kingdom: Bacteria
• Replicon accession: NC_009438
• Strand: -
• Start bp: 3190768
• End bp: 3191253
• Gene Length: 486 bp
• Protein Length: 161 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640499948
• Product: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• Protein accession: YP_001184272
• Protein GI: 146293848
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• TIGRFAM ID: [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.210831
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAATCC GTATCGGTCA TGGTTTCGAT GTTCACAAAT TTGGCGAAGT TCGGCCCTTA 
ATATTGTGTG GTGTTGAAGT ACCCTATGAG ACTGGGCTCG TCGCACATTC CGATGGTGAT 
GTGGTGTTGC ATGCAGTGTC TGATGCCATT CTGGGAGCGA TGGCTCTCGG AGATATAGGC 
AAACATTTTC CCGATACGGA TACCGCCTAT AAAGGCGCTG ATAGCCGCGT ATTATTGCGT 
CATTGCTATG ATTTGGCAAA GCAAAGGGGT TTTGAACTAG GTAATGTTGA TGTCACTATT 
ATTGCCCAAG CGCCCAAAAT TGCACCCCAT ATTGAAGCTA TGCGCCAAGT GCTTGCCACC 
GATTTAATGG CCGAATTGGA TGATATTAAC GTCAAAGCCA CCACTACTGA AAAGTTAGGG 
TTTACAGGAC GTAAAGAAGG CATTGCGGTA GAAGCAGTTG TGTTGATGAG CCGTAAACAA 
GATTAA 

 

Protein sequence

MKIRIGHGFD VHKFGEVRPL ILCGVEVPYE TGLVAHSDGD VVLHAVSDAI LGAMALGDIG 
KHFPDTDTAY KGADSRVLLR HCYDLAKQRG FELGNVDVTI IAQAPKIAPH IEAMRQVLAT 
DLMAELDDIN VKATTTEKLG FTGRKEGIAV EAVVLMSRKQ D