Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2710 |
Symbol | |
ID | 5079925 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 3134977 |
End bp | 3135786 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640499896 |
Product | hypothetical protein |
Protein accession | YP_001184228 |
Protein GI | 146293804 |
COG category | [S] Function unknown |
COG ID | [COG3496] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.784131 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGACGC TTAGCAGTGG TATTTATTAC GGCACTGTAT TCCACAGTCG TTTTACACCC ATCAAGCATA ATTTCAGCTA TGAAATGGCA TTGCTTGCGA TTGATTTGGA TGAGGTTGAT AACATCAGTG CGATGGGGCG AATATTTGCC AGTCAGCGCC GTGCTTTATT GAGATTTAAT CCCAAAGATT ATCTTATTTC TTTTACAGCT AAAACGGGTG AAACCCGCGA ACAGCAAATC ACAGATTTGA GCACTGCGTC ACTTAAAGCT CGAGTGCTTA CCCAAGTCGC AGAGCTTGGG GCTGATAAGC TATGTGATCG AGTGATGTTT GTTGGGCAAA TCCGCCATTT TGGTGTGTAT TTTAGTCCAG TTAATTTTTA TTTTTGTTAT CAAAATCAAA AGCCTTTATA TATGTTGGCC GAAGTGAGTA ATACACCTTG GAACCAACGT CATTGTTATT TAGTGGATTT AACTACACCG CAGCCATCGG ATAAGGTATT CCATGTTTCG CCTTTTATGA CACTGGATAT GCGTTATGTT TGGCATGTCT CAGCACCGAC GGAACATTTA AATATAGGTA TTGAGAATAA TTCAATACCT AAGGTGATTG GCAATCAAGA GGGGAAAAAG CTCTTTAATG CTTCTCTTGT AATGAAACGC CAGCCAATTA ATGCGGTCAA TCTGCGTTCA TTTTTATTCC ACTTTCCTTT TATGACACTA AAGATCTTCT TCGGTATTTA TTGGCAAGCA TTAAAACTCT TTTTCAAACG TGTGCCCTTT GTGCCGCATC CAGCTCAGGT GGAGAAATAA
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Protein sequence | MTTLSSGIYY GTVFHSRFTP IKHNFSYEMA LLAIDLDEVD NISAMGRIFA SQRRALLRFN PKDYLISFTA KTGETREQQI TDLSTASLKA RVLTQVAELG ADKLCDRVMF VGQIRHFGVY FSPVNFYFCY QNQKPLYMLA EVSNTPWNQR HCYLVDLTTP QPSDKVFHVS PFMTLDMRYV WHVSAPTEHL NIGIENNSIP KVIGNQEGKK LFNASLVMKR QPINAVNLRS FLFHFPFMTL KIFFGIYWQA LKLFFKRVPF VPHPAQVEK
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