| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2695 |
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| Symbol | |
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| ID | 5080006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3122585 |
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| End bp | 3123598 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640499877 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001184213 |
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| Protein GI | 146293789 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.933352 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTTGTGC TGCGCTCTTG CATTATACCG AAAGTTAATA TCATTGTCGT AAACTGCTTA
AGGCTACTTT CCATGCTAGA ACTGTTAGAA CCTATTGCGA TTTTTACTCA TGTGGCTAGA
GCTGGTAGTT TTAGTGCCGC CGCAAGAAGG CTTGGGATCT CTAAATCTAA GGTCAGTACG
CAGGTCGCCG ATCTTGAACA TAGACTTGGT GTTCAGTTAA TACAACGTAC TACTCGAAGC
TTAAGCCTGA CTGAAGCTGG GCATTTATTG TATCTGCAAG GTGAAGAATT GCTTCGTGAT
GCAGAGCAAG CGATTGCTAG TGTGCACAAT TTAAATGATG CTACCCGCGG AGTACTTAAG
GTTGGAATTT CACAATCTTT TGGTGCCATG CATATTATTC CAGCCTTACC GTCATTTATG
GCAAAACATC CTGAGCTAGA ACTACAAGTC AGTTTACTTG ATCATAAAGT GGATGTGGTT
AGCGAAGGAT TAGATTTATT ACTGACTATG TCTGAGCAGT TACCATTAGG CATGGTTGCC
AGACCATTAA TGAAATGTCA GTTCCTCTTG GTTGCCTCCC CTGATTATGT TGCTAAGCAC
GGTGAGCCTA CTCGTCCAGA ACAATTAGTT GACCATAATT GTTTAGTTTA CCAAGGTGAG
TGGCATGAAC ACAGTATGTG GCAATTTAAG AAAGGAGATG ATTACTGTGA AATTGGCGTC
TCGGGTAATT TTAGAGTCGA TAACGCTCCA GCATTAAAAT CTGCTGCTAT TAGTGGCTTG
GGTGTTGTGT ATTTGGCAAG TTATTTGATG GAAGATGAGA TTACTAAGGG GACGTTAGTT
CCTTTACTAG AAGATTGGCA ATTAACTCAC CATTTACCAC TACAAGCAGT TTATCCTCGT
CGTAAACATC TTGCGCCTAA AGTGAGTGCC TTTATTGAAT TTATTAAAGA CCATATAGGA
AATCCACCCT ATTGGGATAT TCCCTATGCA GAACTGTTCA GTAAACGTCA GTAA
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| Protein sequence | MFVLRSCIIP KVNIIVVNCL RLLSMLELLE PIAIFTHVAR AGSFSAAARR LGISKSKVST
QVADLEHRLG VQLIQRTTRS LSLTEAGHLL YLQGEELLRD AEQAIASVHN LNDATRGVLK
VGISQSFGAM HIIPALPSFM AKHPELELQV SLLDHKVDVV SEGLDLLLTM SEQLPLGMVA
RPLMKCQFLL VASPDYVAKH GEPTRPEQLV DHNCLVYQGE WHEHSMWQFK KGDDYCEIGV
SGNFRVDNAP ALKSAAISGL GVVYLASYLM EDEITKGTLV PLLEDWQLTH HLPLQAVYPR
RKHLAPKVSA FIEFIKDHIG NPPYWDIPYA ELFSKRQ
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