Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2677 |
Symbol | |
ID | 5079988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 3107254 |
End bp | 3107907 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640499859 |
Product | hypothetical protein |
Protein accession | YP_001184195 |
Protein GI | 146293771 |
COG category | [S] Function unknown |
COG ID | [COG2860] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0757609 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGTTG AAATGCAAGA AACACAATTT ATTGGATTAC TATGGCTTGT TGGTATTCTT GCTGAAGCGA TGACGGGGGC CTTGGCGGCT GGGCGAAAGC AGATGGATTT GTTTGGGGTT GTGATCATTG GCTGCGCAAC GGCAATTGGT GGCGGTACCC TAAGAGATAT GATGTTAGGA AACTATCCTC TGATCTGGGT TGAGAATGTA CATTATCTTC TCGCCATAGC ATTTGCGTCT TTATTGACAG TCGCCATCGC GCCTGTGATG CGCTATTTGT CTAAACTTTT TCTTGCTATA GATGCTTTAG GGCTTGCGGT ATTTTCAATT GTTGGGGCAC AGAAAACGTT AATGTTGGGA TTCAGTCCCA CAATTGCGGT TGTGATGGGG TTGGTTACAG GTGTATTTGG TGGCGTAATT CGCGATATTT TGTGCAATCA AGTACCTTTG ATTTTTAAGA AGGAACTTTA TGCCGTTATT TCACTTTTAA CAGCTGGATT ATATATTACC CTCAAAGCCT ACCAGTTGAC GGAATGGATT AACCTTGTGA TTTGCCTTAG TATCGGCTTT AGTTTGCGGA TGTTGGCGCT ACGATACCAT TGGTCAATGC CTACATTTGA TTATCAAGCA AACAGTGATC AACAGTCCCA CTAA
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Protein sequence | MTVEMQETQF IGLLWLVGIL AEAMTGALAA GRKQMDLFGV VIIGCATAIG GGTLRDMMLG NYPLIWVENV HYLLAIAFAS LLTVAIAPVM RYLSKLFLAI DALGLAVFSI VGAQKTLMLG FSPTIAVVMG LVTGVFGGVI RDILCNQVPL IFKKELYAVI SLLTAGLYIT LKAYQLTEWI NLVICLSIGF SLRMLALRYH WSMPTFDYQA NSDQQSH
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