| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2594 |
|---|
| Symbol | flgE |
|---|
| ID | 5078283 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 3015418 |
|---|
| End bp | 3016779 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640499777 |
|---|
| Product | flagellar hook protein FlgE |
|---|
| Protein accession | YP_001184114 |
|---|
| Protein GI | 146293690 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1749] Flagellar hook protein FlgE |
|---|
| TIGRFAM ID | [TIGR03506] fagellar hook-basal body proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTTTA ACATTGCATT GAGTGGCATT TCGGCTGCGC AGAAAGATTT AAACACGACT
GCGAACAACA TTGCTAACGC AAATACTATT GGTTTTAAAG AGTCACGTGC CGAATTTGCG
GATGTGTACG CTAATTCAAT TTTCTCTAAT TCTAAAACGG CCGTTGGTGG CGGTGTTGCA
ACGAGTCAAG TGGCTCAGCA ATTCCATCAA GGAAGTTTAC AGTTAACGAA TAACTCTCTG
GATTTGGCGA TTAAAGGTGG TGGTTTTTTT GTCACATCTT CAGAGCTTGG CACATTAGAT
TTTTCCTATA CTCGGGCTGG TGCATTTAAA GTTGATGCGA GTAACTATAT GGTTGACTCA
TCTGGTAACT ACTTGCAAAC CTTTCCCGTT GATAAAGAAG GGAACTCAAC GTCTGTCAGT
TTAACGACTG CTAAACCTGT TCAAATCCCC GATACCGCAG GTAGCCCAGT AAAGACTGAG
AATGTCAGTT TTCAGATGAA TTTAAATGCT AAAGAGGGGT CACTCGATCC CGCTGCGTTC
GATCCGACAG ATCCTAAAAC GTATACCAGT GTCACCTCAA TGACGATTTA TGACTCATTG
GGTGAGCCAC ATATCATGAC CACTTATTTT GTTAAGCCCA CTAATGGGGC GCACAACGGC
GAAAACAATT GGGTCGCTTA CTATGCTGTT GATGGTAAAC AAGTTGATGT CGCTGGCGCT
GCTGGTACTT ACCAAACTGA TACAGATGGT GATGGGGTTC CTGACTCAAC CGGTACAGCG
GAAACGGCTG GTGGATGGCG TGGATCGGTA TTGAAGTTTA ACTCTGTCGG GGTTTATACG
GGAAGTGATC CAGCCATCGT AACCACTGAA ACACTTGGTG TTGGTGGTGC TGGTGTTCTA
GGCCCAGGTG CGGATGGCAC TCAAAGTTTG ACAGTAAAAT TTAATGCACC GACCCAGTAT
TCGGCTCCCT TTGCTGCCAC TGAATTGACC CAAGATGGTA CGACTGTGGG CCGTTTAACC
AATGTTGAAA TTGGTGCTGA TGGTTTAATC ACCGCGAGCT ACTCAAATGG TTCGACCGTG
CCTTTAGCGC GTGTTGCTTT GGTGCGTTTT GCTAATGAAC AAGGATTGAC TCAAGTGGGT
AATACCTCTT GGAAGGCGAG TCTAAATTCG GGTCCCGCAT TAGCGGGTGA AGCAAATAGT
GGCACATTTG GTAGTCTCAG TTCTTCTGCG TTAGAGCAAT CGAATATTGA TTTGACGACC
GAGTTGGTGG ATTTGATTTC TGCGCAGCGT AACTTCCAAG CGAACTCACG TACTTTGGAA
GTTAATAACA CCTTGCAACA AACCGTGCTG CAGATCCGCT AG
|
|---|
| Protein sequence | MSFNIALSGI SAAQKDLNTT ANNIANANTI GFKESRAEFA DVYANSIFSN SKTAVGGGVA
TSQVAQQFHQ GSLQLTNNSL DLAIKGGGFF VTSSELGTLD FSYTRAGAFK VDASNYMVDS
SGNYLQTFPV DKEGNSTSVS LTTAKPVQIP DTAGSPVKTE NVSFQMNLNA KEGSLDPAAF
DPTDPKTYTS VTSMTIYDSL GEPHIMTTYF VKPTNGAHNG ENNWVAYYAV DGKQVDVAGA
AGTYQTDTDG DGVPDSTGTA ETAGGWRGSV LKFNSVGVYT GSDPAIVTTE TLGVGGAGVL
GPGADGTQSL TVKFNAPTQY SAPFAATELT QDGTTVGRLT NVEIGADGLI TASYSNGSTV
PLARVALVRF ANEQGLTQVG NTSWKASLNS GPALAGEANS GTFGSLSSSA LEQSNIDLTT
ELVDLISAQR NFQANSRTLE VNNTLQQTVL QIR
|
|---|
| |