| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2564 |
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| Symbol | fliR |
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| ID | 5078253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 2986576 |
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| End bp | 2987373 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640499747 |
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| Product | flagellar biosynthesis protein FliR |
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| Protein accession | YP_001184084 |
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| Protein GI | 146293660 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGCTGT TGCTCGATAC CTTAATGCAG ACCATCGCAT CTTACATGTG GCCGTTATTT
CGCGTTGCAA GCATGTTGAT GGTGATGGTG GTATTTGGCG CCGCAACGAC TCCTGCTAGA
GTGCGTTTAC TCCTTGCCAT GGCGATTACC TTTGCAATTG CGCCTGTTTT GCCTCCGGTG
GAGAATGCGG ATTTATTTTC CCTTAGTGCT GTTTTTATTA CGGCGCAACA AATTATTATT
GGCGTTGCGA TGGGGTTTGT TTCCCAGATG GTAATGCAGA CTTTTGTATT AACAGGGCAA
ATTATTGGTA TGCAAACCAG TTTAGGCTTT GCCTCTATGG TTGACCCTGG TTCTGGACAA
CAAACCCCTG TCATTGGTAA CTTTTTCCTC TTGCTTGCGA CGCTGATTTT TCTGGCTGTT
GATGGTCACC TTCTCATGAT CCGTATGCTA GTCGCAAGTT TTGAGACTCT TCCTATTTCT
AACCAAGGGC TAACGCTTAC AAGCTACAGA TCACTTGCAG AGTGGGGCTC GTATATGTTT
GGCGCGGCTT TGACCATGTC AATTTCGGCG ATCATTGCGC TGTTACTGGT TAACCTCTCT
TTTGGGGTAA TGACCCGTGC CGCACCACAG TTGAATATTT TTTCTATTGG TTTTCCTATC
ACTATGATTG GTGGGCTTTT AATCCTTTGG CTAACGCTGA CGCCAGTAAT GGCGCATTTT
GACGAAGTAT GGGCTGCAGC TCAGGTTTTG CTATGTGATA TTTTGGGTCT TCAATGTCAA
GCCGATGGCT TGATATAA
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| Protein sequence | MELLLDTLMQ TIASYMWPLF RVASMLMVMV VFGAATTPAR VRLLLAMAIT FAIAPVLPPV
ENADLFSLSA VFITAQQIII GVAMGFVSQM VMQTFVLTGQ IIGMQTSLGF ASMVDPGSGQ
QTPVIGNFFL LLATLIFLAV DGHLLMIRML VASFETLPIS NQGLTLTSYR SLAEWGSYMF
GAALTMSISA IIALLLVNLS FGVMTRAAPQ LNIFSIGFPI TMIGGLLILW LTLTPVMAHF
DEVWAAAQVL LCDILGLQCQ ADGLI
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