| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2545 |
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| Symbol | |
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| ID | 5080889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 2965291 |
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| End bp | 2966796 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640499728 |
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| Product | amino acid/peptide transporter |
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| Protein accession | YP_001184065 |
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| Protein GI | 146293641 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3104] Dipeptide/tripeptide permease |
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| TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGTAG CAAAACCACA AGGGACAATG CTTGGGCATC CCAAAGGATT GTTCCTGCTA
TTTACAACAG AGCTATGGGA ACGTTTTAGT TATTACGCAA TGCGCGCCAT TTTGGTGCTG
TATCTAGTTG ATCAAGTTGG CAAGCAAGGT GGTGGTGGGT TAGGTTGGAG CCAAGCTGAT
GCACTGTCAC TCTATGGTAC CTTCACTGCT TTAGTTTACC TAACACCACT GATTGGTGGC
TGGTTAGCAG ATAATTTTCT TGGTCAACGT AAAGCCATCT ATTTTGGTGG CGCATTGATG
GCTGCGGGCC AGTTTATGTT AGCTGCACCA CATGCATGGT TTCCTGGTGT TGAAACGACA
CTCTTCTATG TAGGTTTGGG AACGCTTATT TTAGGTAACG GCTTATTTAA ACCTAATATA
TCCACTATGG TTGGCGATCT CTATGAAGAA GGCGATCATA GACGCGATGG TGCGTTTACC
ATCTTCTATA TGGGGATTAA CTTAGGTGCT GCATTATCTG GTTTTGTTGT TGCATGGGCT
TATACCAGCT TTGGTCATAC TGAAATAATC AATGACCAAG AAGTGTTTGT TAATAACTGG
CAAGCAGGTT TTTTCTGTGC TGGGATTGGT ATGCTACTTT CCCTTGTTAT TCAATTCTTA
TTTGCCCAAA AACTACTTGG TGATATTGGT ACAGTGCCTG CGGCGAGACT TGAACGTGAA
CGCCAAGCTC AGTTGGGGAA TGTGCGTAAA GAACCGCTAA CCAAAGTTGA ACGCGACCGT
ATTAAAGTCA TTATGGTGCT TGGTCTCTTT ACCATCATCT TCTGGGCAGG TTTTGAACAA
GCTGGCGGGT TAATGAACTT GTTTACCAAT GAATTCACTG ACCGTTATAT TGGTACATGG
GAAGTTCCCA CCACCTATTT CCAATCACTT AACGCCATTT TCATTGTGTT ATTTGCCCCC
GTTGTTGCTT CAATTTGGAT CCGTTTAGGT AAAAATGAAC CTAACTCACC CGTTAAATTT
GCCTTAGGCC TATTCTTATT GGCGATCGGT TTCTTATTTA TGATTGGCGC GGTAGTTGAA
ATGGGGGGCA ATCCTAACGC TAAATCCAGC ATGTGGTGGT TAGTGGGTGC TTATTTCTTC
CATACTATGG GTGAACTCTG TCTATCACCT ATTGGCTTAT CTATGGTAAC TAAGCTTGCT
CCATTACGTA TTGCATCGCT AATGATGGGC GCTTGGTTCC TCTTTATCGC TATGGCGAAC
AAAGTGGCTG GTGTTGTAGG TTCGTTTATT GGCCATGGTG GTGGCAAAGA GGAACAACTC
GCGAATGCCA TGTCTATTTT CGCAGGTATT GCCATTACAG CCACATTTTC TGCTGTGGTG
CTCTACTTTA TGGCAGACAA GTTAGTTGAC TGGATGCATG GCGCAGAAAC GAAGCATTCT
TCAGAAGCGC AGGCTTTAGA AGATGAAATT GCCGTAACTG CTGAGCACGA AGCGATTAAA
CGATAA
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| Protein sequence | MSVAKPQGTM LGHPKGLFLL FTTELWERFS YYAMRAILVL YLVDQVGKQG GGGLGWSQAD
ALSLYGTFTA LVYLTPLIGG WLADNFLGQR KAIYFGGALM AAGQFMLAAP HAWFPGVETT
LFYVGLGTLI LGNGLFKPNI STMVGDLYEE GDHRRDGAFT IFYMGINLGA ALSGFVVAWA
YTSFGHTEII NDQEVFVNNW QAGFFCAGIG MLLSLVIQFL FAQKLLGDIG TVPAARLERE
RQAQLGNVRK EPLTKVERDR IKVIMVLGLF TIIFWAGFEQ AGGLMNLFTN EFTDRYIGTW
EVPTTYFQSL NAIFIVLFAP VVASIWIRLG KNEPNSPVKF ALGLFLLAIG FLFMIGAVVE
MGGNPNAKSS MWWLVGAYFF HTMGELCLSP IGLSMVTKLA PLRIASLMMG AWFLFIAMAN
KVAGVVGSFI GHGGGKEEQL ANAMSIFAGI AITATFSAVV LYFMADKLVD WMHGAETKHS
SEAQALEDEI AVTAEHEAIK R
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