Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2521 |
Symbol | |
ID | 5080865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 2934747 |
End bp | 2935457 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640499704 |
Product | putative lipoprotein |
Protein accession | YP_001184041 |
Protein GI | 146293617 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.43848 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTATAA ATAAAAATCT ATTGCGACTA CTAACCATTT CCACTGTATT GATGGGCATA ACGGGTTGTA GTCAACGAAT TAGCGCCCTC AACGATACCA TCAAATTAGC ATTTCTCGGT GAGGATGACG TTAAGCTCAC GTCTGAACAA GTGAAATCGA ATCCCTATGC CAGTATTTAT GCCAAGATAG GCGACACCCC TCAGGCATTT GTGGTTTTAG CCTTTGCAGA ACCTAAAGTG ACCCTTTCCC ATGTTAGAAC AGAGCCTGAC ACCACAGAGC TAAAATGGTT ATCTGCAGAT AATGGTATGT TAGTGACAAT AAATGGCCGC TTAATTAAAA CCCATAATCT GCTGGAGGGT AATTTAGCTG CTGTAGAAAG CCATGAGCCT GATCCTATTG TGTTAGGTTT GCATTTAGAC AACACCCCAA AAACCTGGAC TCGCACACTC GACTGGCAAC CTGGGTACCA CTATGGTTAT AAAGTGACTT CTCAATTTAA ATTGATTGCC GACGAAAACG TCCTGATCAA CGATACCCCA ACGCAGCTAT TACACTATAG CGAAACGGTA TCTGTTGAAG GTCTAAATAT TCAATATCAA AATGATTTTT GGCTAAAGCC AGATAATGGG CATGTGGTAA AAAGTCGTCA GAAAATTGCG CCTAATCTGC CTTTTATCGA CATTATCTTA CTCAAGCCAT TTGCGTCTTA G
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Protein sequence | MRINKNLLRL LTISTVLMGI TGCSQRISAL NDTIKLAFLG EDDVKLTSEQ VKSNPYASIY AKIGDTPQAF VVLAFAEPKV TLSHVRTEPD TTELKWLSAD NGMLVTINGR LIKTHNLLEG NLAAVESHEP DPIVLGLHLD NTPKTWTRTL DWQPGYHYGY KVTSQFKLIA DENVLINDTP TQLLHYSETV SVEGLNIQYQ NDFWLKPDNG HVVKSRQKIA PNLPFIDIIL LKPFAS
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