| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2516 |
|---|
| Symbol | |
|---|
| ID | 5080860 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 2929486 |
|---|
| End bp | 2930220 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640499699 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001184036 |
|---|
| Protein GI | 146293612 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1720] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00104] probable methyltransferase, YaeB/AF_0241 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.507921 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACATTTA CCAACCAAAT TGTCGCCATA GCGACATGCC GTACACCTTA TAAACAAAAG
TTTGGTATTC CAAGACAGCC CGGACTCGTT GAAGCTCGCG GCTATGTCGA ACTCGAACCT
CATGTGAATC ATCTCGATGC GGTGCGTGGC ATAGAGCAAT ATTCCCACCT TTGGTTGTTG
TTTTGCTTCC ATGAAAATCT CGCCCAAGGC TGGAAAACCA CAGTTCGGCC ACCCCGTTTA
GGTGGTAATG AAAAACTCGG CGTGTTTGCC ACTCGTTCCA CTTTTAGGCC TAATGGCATT
GGTCAGTCGG TTGTTAAACT CCACGGGGTA GTGCAGCGTA AGGGCAAAGT GTGCCTTGAA
ATTTCGGGTA TGGATCTTGT CGATGGCACG CCGATAATTG ATATTAAGCC CTATATTCCC
TTCTCAGATT CGATTATGAA TGCAGTGGGC GGTATCGCCC AAGAAGCCCC TAAACTGATT
AGCGTAGTGT TTTCCGATCT CGCAACGACC CAGATTGATA CCTATGGCAA ACAGGACGCT
TATACTGATT TAGCGATACT TATCCGCGGC ATATTGGGGC AAGATCCTCG CCCAGCATAT
AAAAAAGCCA AGGATGATCC TAAGTTATAC CAAGTCGCTT TATATGATTT AGATATCTTC
TGGCAGATGG CGGTCGATGA CGATGATCGG GAATACATTC AAGTGCTCGA ACTCAAACCG
GGGAAATGTG GCTAA
|
|---|
| Protein sequence | MTFTNQIVAI ATCRTPYKQK FGIPRQPGLV EARGYVELEP HVNHLDAVRG IEQYSHLWLL
FCFHENLAQG WKTTVRPPRL GGNEKLGVFA TRSTFRPNGI GQSVVKLHGV VQRKGKVCLE
ISGMDLVDGT PIIDIKPYIP FSDSIMNAVG GIAQEAPKLI SVVFSDLATT QIDTYGKQDA
YTDLAILIRG ILGQDPRPAY KKAKDDPKLY QVALYDLDIF WQMAVDDDDR EYIQVLELKP
GKCG
|
|---|
| |