Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2469 |
Symbol | |
ID | 5078603 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 2865265 |
End bp | 2866758 |
Gene Length | 1494 bp |
Protein Length | 497 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640499637 |
Product | sodium/proline symporter |
Protein accession | YP_001183989 |
Protein GI | 146293565 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0591] Na+/proline symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family [TIGR02121] sodium/proline symporter |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00121427 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTGCCA CTTTTAATAA TAAAAAGATG GTATGGGCAA TTATGGTGAT CGAAAACCCA ATTTTAATCA CATTTGTAGG TTATTTAGTA TTAATGATGG CCATCGGTTT TTGGGCTTAC CGCGCCACGG ATACTGTTGA TGACTATATT TTAGGTGGAC GTAAGATGGG GCCCGCTGTT ACGGCACTTA GCGTTGGGGC GTCAGATATG TCAGGCTGGT TATTACTCGG CTTACCCGGC GCTGTATACT TAAGTGGTTT AAGTGCTGCA TGGATTGGGA TCGGTCTTAT TTTTGGCGCG TGGCTTAACT GGTTATTTGT GGCAAAACGT CTGCGTATTT ACACTCAATT GGCCGATAAT GCCCTCACCC TTCCGGATTT TTTTGAAAAA CGCTTCCACG ATAATCAAGG CTACCTCAAG CTCGTTTCAG CCGTCACTAT CTTAGTCTTT TTTACGTTCT ATGCCTCTTC AGGTATGGTG GGGGGGGCCA TTTTATTTGA AAAGGTCTTT GGTTTAGATT ACACCGCAGC CTTAGTGATT GGCTCAGCTA TTATTGTTGG CTACACTTTT ATTGGCGGGT TCTTTGCGGT CAGTTGGACT GATTTTTTTC AAGGTTGTCT GATGCTTATC GCATTATTGA TTATCCCTTT TGCGATTTTT TCCCACCCAG AAACCCATGC GGGAATTGAC GCTATTGACC CTGCCATGTT GGCACTCGTC AATGATAAAA CGACCACCAT AGGTATGATA TCGCTCCTTG CTTGGGGACT GGGTTATTTT GGTCAACCAC ATATTCTGTC ACGCTTTATG GCGATTGGCA GTGCTAATGC ACTACCACTA TCTCGCCGTA TTGCTATGAG CTGGATGATA CTTTCACTTA TTGGTGCTCT AGCAACAGGC TTGGCGGGTT CGGTATATTT TGCAACAACG CCCTTAGCGA ACGCCGAAAC GGTTTTTATT CATTTAGCTC AAGCGGCCTT TAATCCATGG ATTGGTGGTC TATTAATCGC CGCTATTTTA TCGGCCATTA TGAGCACTAT TGATTCGCAA CTTTTAGTTT GCTCAAGCGT TATTACTGAG GATTTTTATC GCAAATGGCT AAGACCGACT GCTGATGATA GAGAGTTAAT GATGGTGGGT CGTTTAGGCG TACTCGCTAT CGCTGTGATT GCGGGCATTA TTGCACTGAA CCCTGAGAGC AGCGTACTCA GTCTAGTGAG TTATGCTTGG GCGGGCTTTG GGGCCGCCTT TGGTCCCGTT GTCTTGTTAT CCCTATTTTG GAAGCAATAT AGCCGCAATG GTGCTATTGC TACTATTATT GTTGGCGCCT TAACCGTGGT GATCTGGAAA CAATTAACGG GGGGAATTTT TGATGTATAT GAAATTCTAC CCGGCTTTAT TTTGGCGATA ATGACAGGGG TTGTTGTCAG TAAATTGTCT GCACCTAATG CCAAAATCAT GGCTGAGTTT GAGCAATTTA AGTCCACACT GTAA
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Protein sequence | MLATFNNKKM VWAIMVIENP ILITFVGYLV LMMAIGFWAY RATDTVDDYI LGGRKMGPAV TALSVGASDM SGWLLLGLPG AVYLSGLSAA WIGIGLIFGA WLNWLFVAKR LRIYTQLADN ALTLPDFFEK RFHDNQGYLK LVSAVTILVF FTFYASSGMV GGAILFEKVF GLDYTAALVI GSAIIVGYTF IGGFFAVSWT DFFQGCLMLI ALLIIPFAIF SHPETHAGID AIDPAMLALV NDKTTTIGMI SLLAWGLGYF GQPHILSRFM AIGSANALPL SRRIAMSWMI LSLIGALATG LAGSVYFATT PLANAETVFI HLAQAAFNPW IGGLLIAAIL SAIMSTIDSQ LLVCSSVITE DFYRKWLRPT ADDRELMMVG RLGVLAIAVI AGIIALNPES SVLSLVSYAW AGFGAAFGPV VLLSLFWKQY SRNGAIATII VGALTVVIWK QLTGGIFDVY EILPGFILAI MTGVVVSKLS APNAKIMAEF EQFKSTL
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