| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2465 |
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| Symbol | |
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| ID | 5078599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 2860186 |
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| End bp | 2862177 |
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| Gene Length | 1992 bp |
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| Protein Length | 663 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640499633 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001183985 |
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| Protein GI | 146293561 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5271] AAA ATPase containing von Willebrand factor type A (vWA) domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCTGC ATTTTATTCG TCCCGAATGG CTATTCGCAC TATTACCACT AGCCTTAGTG
TTATTGATTT TATGGCGACA TCACCAAAAC CACAGTGCTT GGAACCGTTA TATTGCACCG
CACTTAGCCA AGATATTGGT CACCCAAGGC AGTAATAAAT CCCGCCGTCC GTTGCATTTA
TTAGCCTTCA CTTGGCTGAT TGCAACTTTT GCACTCGCCG GGCCTGCTGT GAATAAACAG
TCCTTACCTG TGTTTGCCGC AGAGCAAGGT CGCGTGTTAG TCATGGACAT GTCTGTGTCG
ATGTTCGCCA CCGATCTTGC GCCGAATCGA TTAACCCAAG CCAAATTTAG GGCAACCGAT
CTGCTGCGTA ATCTTAAAGA AGGTGAAACA GGTTTAGTCG CCTTTGCCGG CGATGCCTTT
ACTATCAGTC CTTTAACCCG TGATACTGGC ACACTACTCA ATTTACTGCC GACCTTAAGT
CCTGAGATCA TGCCAGTGCG TGGTTCAAAC TTAACGGCAG GGCTAATCCA AGCCAAAATG
CTACTGGCCC AAGGTGGTCA TATCCGTGGT GATATTATCC TAATGACAGA TGGTATTACC
CCGCACCAAT TTAATGAGGC CAACTCAGCA TTAAGCGGCA CGCAATATCG CCTCGCGATT
ATCGCTTTTG GAACGAGCCA AGGTGCGCCA ATCCGGCTAC CTGATGGACA ATTACAGCGC
GATAGCAGTA ATGAAGTCGT GGTAGCCAGC ACTGACTTTG CCTTATTACA AAAACTGGCA
ACGAACTATA AAGGCACATT AATCCAAAAT CGCACCGATG GTAACGATTT ACTCCAATTA
CAGCAGTGGT TGAGTGAAAC GGGTGATGCT AAAGCCACGG ATTTAGATGG CGAAACTTGG
CAGGATCTCG GTCCTTACCT CGCATTATTA TTACTGCTAC CCGCCCTTTT CAGCTTTAGA
CAAGGAATCG TAGCCAGTAT TGGGTTCGTC ACTCTTACAG GCGGCTTACT GCTCGCGGCA
GTGCCTCAGC CAGCCCAAGC CAGTCTGTGG AATGATTTAT GGCAAACCGC AGATCAACAA
GCGATGCAGG CCTATCAATC CCAAGATTAT TCCAACGCTG CGAAACAATT TGAGTCGCCC
CAATGGCGTG GCAGCGCACA ATATAAAGCG GGGGATTATG AGCAAGCGTT AAAAACCTTC
GAGCAAGATA GCTCAGCCCA AGGCCTATAC AATCAAGGTA ATGCATTGAT GCAACTCGGT
AAACCCGATA AAGCTAAGGA ACGCTATCAA GCGGCGCTTG AACAACAACC CAACTTTCCC
GATGCAAAGG CTAATCTTGC CCTTGCTGAA AAACTATTAG AAGAGCAGCA ACAGCAAAGT
AAAAATGATC AACAGAATAA AAACCAAGGT CAACAAGGGG ATCAACAAAA CTCGTCAGAC
AATGGCGAGC AACAATCGAA TGATCAACAA TCAGGCAGTC AAGCATCACA GGAGCAACAG
CAGCCTGACC AAGACAAATC TCAGCAAAAT AAATCAGAGC AAGCAGAACA AGGATCTAAA
GAGCAACAGG ATAATGCCAA CGCGGATCAA AATCTTGAGC AGCAAAAAGA GGATGAACAA
CCGTCAGAAC AAGAGAAGCT GAATGGTCAT AATCAGAGTG ATAGCGATGA AACGCAAGAA
AATGCGCCTG TAGAGAATGA AGCAAAAATG CAAGCACAGA CTACAGCCGA TACAGAGCAA
TCTGCTGAGC AAGAAAAACA AAACCTTGGT GCCAAGGAAG CTCCTGAAAA AAATACACCA
GATAAACAAG ACGCAACAAT AACTGAATCA CTCGAACCGC CCATGAATAG CGAACCACTG
CCACCAGAAA TGCAGCGAGC CCTACGGGGC GTGAGTGAAG ATCCACAAGT GTTATTGCGC
AATAAAATGC AATTGGAATA CCAAAAACGC CGTCAAAATG GCCAAATATC AAGGGATAAC
GAACAGTGGT AA
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| Protein sequence | MSLHFIRPEW LFALLPLALV LLILWRHHQN HSAWNRYIAP HLAKILVTQG SNKSRRPLHL
LAFTWLIATF ALAGPAVNKQ SLPVFAAEQG RVLVMDMSVS MFATDLAPNR LTQAKFRATD
LLRNLKEGET GLVAFAGDAF TISPLTRDTG TLLNLLPTLS PEIMPVRGSN LTAGLIQAKM
LLAQGGHIRG DIILMTDGIT PHQFNEANSA LSGTQYRLAI IAFGTSQGAP IRLPDGQLQR
DSSNEVVVAS TDFALLQKLA TNYKGTLIQN RTDGNDLLQL QQWLSETGDA KATDLDGETW
QDLGPYLALL LLLPALFSFR QGIVASIGFV TLTGGLLLAA VPQPAQASLW NDLWQTADQQ
AMQAYQSQDY SNAAKQFESP QWRGSAQYKA GDYEQALKTF EQDSSAQGLY NQGNALMQLG
KPDKAKERYQ AALEQQPNFP DAKANLALAE KLLEEQQQQS KNDQQNKNQG QQGDQQNSSD
NGEQQSNDQQ SGSQASQEQQ QPDQDKSQQN KSEQAEQGSK EQQDNANADQ NLEQQKEDEQ
PSEQEKLNGH NQSDSDETQE NAPVENEAKM QAQTTADTEQ SAEQEKQNLG AKEAPEKNTP
DKQDATITES LEPPMNSEPL PPEMQRALRG VSEDPQVLLR NKMQLEYQKR RQNGQISRDN
EQW
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