| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2414 |
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| Symbol | |
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| ID | 5080492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 2796219 |
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| End bp | 2798432 |
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| Gene Length | 2214 bp |
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| Protein Length | 737 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640499582 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001183934 |
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| Protein GI | 146293510 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.486485 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGACTT TTCCTCTCTC CAGCATCGCA CTCGTCTGCA GACAAGCCCT CGTTAACCCG
AAGCTATTGC TGTACTCAGC CATGTTAGCC ACGGTTCCCC ATGCCACAGC TGACACTGTC
GATGCGGATA GTAAGACTAA AAAGCACCAG AAAGAAATTG AAGTCATCAA TGTCATTGGC
GCTAAGGATT TACACGACAA CCGTTATAAA ACCCAAGCGA TGAACACGGC AACTGGGCTC
GATTTATCCT ATCTAGAAAC GCCGCAATCG GTCACGTCTA TCACCCGCCA AATGATGAAT
GATCAACAGC TTAATAGCGT GATTGATGCC ATGACCAGCG TTGCGGGGAT CAATGCCCGC
CCAATGGATA ACGACAGATA CAGTATTAGT GCCCGCGGCA TTGCCGTGAC CAGCATTTTG
TACGATGGTG TGCCAACCAC CTACGACACC CGCTTCAACT ATGGGGATAA TCTGATCGAC
ACCGCCATCT ACGAACGAGT AGAAGTGGTA CGCGGCGCGA CAGGTTTAAT GACAGGTGCG
GGTAACCCCT CGGCGGCCAT TAACCTTATC CGTAAACGCC CGACTCAAGA GTTTATGGGC
AACACCTCGT TAAGTGTGGG CTCATGGAAT AATGTGCGCG GTATGGTCGA TGTTTCCAGC
GGCTTAAATG ACTCGGGTTC TGTACGCGGT CGCGTGGTGG CCGCCTATCA AGATAAAGAT
TCGTTCCAAG ACAGGTACGA GCAGCAGCGC ACCACGCTAT ACGGCATAGT CGAAACCGAT
ATTGGCGATA GCACCTTATT CACCCTTGGT GTCGATTACC AAGATGCCAC ACCGAGCGGC
ACTATGTCGG GCGGTTTACC GCTATTTTAT AGCGATGGCA GTCGCACTAA TTATGATCGT
GCCACTTCAA CGGCGCCCGA TTGGGGCTCG GCGCATACCC AAGGCCTCAA CACTTTTGCG
AGTCTCGAAC ACAGATTAGA TAACGGTTGG AACCTAAAAG GGACTTACAC CTACGGCGAT
AACTCATTGG AGTTCGATGT ACTATGGGCC ACGGGATATC CTGATCCTGT AACCAATATC
GGCGCCACTG CAGGCTCTAT CGCCTATGTC GACGGCAGTC GCACCCAACA CAATGTGGAT
TTACGCGCCG AAGGACAATA CCAACTCTTT GGTCAGGAAC ATCAATTGAT GTTTGGCTGG
AATGGCCAAC GCCAAGAGTT CGCCAATCCC TACTATTATC CCACTGCGGC AGTACCGCCT
TTGGGGGATT TTCGCGATCC GAACTTCCAA TATCCAAAAC CTCAATGGAA GGAAACCTAT
ACCACGGGTT CATTTGGCGA AACCAAACAG AATGCAGCCT ATGTAGCGAC TCAGCTTAAT
CTCAGCGACG CTTTAGCTGT CCTCGTCGGA TTACGCCTCA ATGAGTGGGA AACCGACCAA
GATAATTTTG GCAGCCGCTA CGATTTCAGC ATCAGCAACG AACTCACGAC TTACTTCGGC
CTCACCTACG CCCTGACCGA GCAATATTCG CTCTACGCCA GTTATACGGA TATTTTTGCA
CCGCAAACCT TGCAGCGAAT CGATGCCAGT TATATTGACC CAGTGAAGGG TAAGAACTAC
GAGGCAGGGA TTAAAGCCAG CCTAATGGAT GAAAGTTTAG ATATGTCGCT GTCGGTGTTT
GAAATTCGTC AGGACAATGT CGGAGAACGT ACAGGCGATG TACTCCCTGG CACCACCATC
CCAGTGTACA GAGAGGTTAA CGGCACCCAA ACCCAAGGTT TTGAGTTTGA ATCCACAGGC
AAAATCACCG ATGACTGGAA TATTTACTTC GGTTACACCC AGTTCAGCAC CGAGGATCCT
AAGGGCAAAC GCATCAATAC CACCTCACCA CGCCAGCAGG TAAAAGTCTT TACAACCTAT
CGATTTAGTG GGGATTGGCA CAAGCTACAA GTCGGTGCAG GTATAAATTG GCAGAGTCGC
ATTTACATGA CAGTGAAAAC ACCACCACCA ACCCCAATAG AGGTGGAAGT CGGTCAAGAC
GCCTATGCCC TAGTCAACTT AATGGCAAGT TACGCCTTTA CCGAACAGCT TAAGCTTAGC
GCCAACCTGA ACAACGCCTT AGATAAAACC TACTACAGCC AAGTCGGTCA ATATAGTCAA
TTCCAATACG GTACGCCGCG AAGTGCCAGC TTAACCTTGG ACTATCGCTT CTAA
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| Protein sequence | MKTFPLSSIA LVCRQALVNP KLLLYSAMLA TVPHATADTV DADSKTKKHQ KEIEVINVIG
AKDLHDNRYK TQAMNTATGL DLSYLETPQS VTSITRQMMN DQQLNSVIDA MTSVAGINAR
PMDNDRYSIS ARGIAVTSIL YDGVPTTYDT RFNYGDNLID TAIYERVEVV RGATGLMTGA
GNPSAAINLI RKRPTQEFMG NTSLSVGSWN NVRGMVDVSS GLNDSGSVRG RVVAAYQDKD
SFQDRYEQQR TTLYGIVETD IGDSTLFTLG VDYQDATPSG TMSGGLPLFY SDGSRTNYDR
ATSTAPDWGS AHTQGLNTFA SLEHRLDNGW NLKGTYTYGD NSLEFDVLWA TGYPDPVTNI
GATAGSIAYV DGSRTQHNVD LRAEGQYQLF GQEHQLMFGW NGQRQEFANP YYYPTAAVPP
LGDFRDPNFQ YPKPQWKETY TTGSFGETKQ NAAYVATQLN LSDALAVLVG LRLNEWETDQ
DNFGSRYDFS ISNELTTYFG LTYALTEQYS LYASYTDIFA PQTLQRIDAS YIDPVKGKNY
EAGIKASLMD ESLDMSLSVF EIRQDNVGER TGDVLPGTTI PVYREVNGTQ TQGFEFESTG
KITDDWNIYF GYTQFSTEDP KGKRINTTSP RQQVKVFTTY RFSGDWHKLQ VGAGINWQSR
IYMTVKTPPP TPIEVEVGQD AYALVNLMAS YAFTEQLKLS ANLNNALDKT YYSQVGQYSQ
FQYGTPRSAS LTLDYRF
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