Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2270 |
Symbol | sdhB |
ID | 5080242 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 2615088 |
End bp | 2615795 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640499432 |
Product | succinate dehydrogenase iron-sulfur subunit |
Protein accession | YP_001183790 |
Protein GI | 146293366 |
COG category | [C] Energy production and conversion |
COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0879984 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAATTGG AATTTGCAGT TTATCGTTAC AATCCTGATG TAGATACTAA ACCATACATG CAGGATTACA GCTTAGAAGT GGCAGATGGC TCAGACATGA TGGTGCTTGA TGCACTGATT AAGTTAAAAG AGCAAGATCC GACACTATCA TTCCGCCGCT CATGCCGTGA AGGTGTGTGT GGTAGCGATG GCGTGAACAT GAATGGTAAA AATGGTCTGG CGTGTATTAC CCCGATTTCA ACCTTTAAAG GTAAGAAATT GGAGATCCGT CCGTTACCAG GTATGCCTGT TGTGCGTGAC TTAGTGGTTG ATCTTACTCA GTTCTATAAG CAGTATGAGA AGATCAAGCC TTATCTCATC AATGATGAGA AAATGCCTGC CCGTGAACAT TTACAATCCC CTGAAGAGCG TGCTCATTTA GACGGGTTGT ACGAATGTAT CATGTGTGCA TGCTGTTCTA CGGCTTGTCC ATCATTCTGG TGGAACCCTG ATAAGTTTAT CGGTCCTAGC GGTTTGCTCC ATGCATACCG TTTCTTGATC GACAGTCGCG ATACAGCTAC AGAAGAGCGT TTATCTGAGC TGGACGACGC CTATAGCGTG TTCCGTTGCC ACGGCATCAT GAACTGCGTT GATGTGTGTC CAAAAGGTCT TAATCCGACT AAAGCAATTG GTCATATTAA GTCCATGCTG TTGAAGCGAG CAGTGTAA
|
Protein sequence | MKLEFAVYRY NPDVDTKPYM QDYSLEVADG SDMMVLDALI KLKEQDPTLS FRRSCREGVC GSDGVNMNGK NGLACITPIS TFKGKKLEIR PLPGMPVVRD LVVDLTQFYK QYEKIKPYLI NDEKMPAREH LQSPEERAHL DGLYECIMCA CCSTACPSFW WNPDKFIGPS GLLHAYRFLI DSRDTATEER LSELDDAYSV FRCHGIMNCV DVCPKGLNPT KAIGHIKSML LKRAV
|
| |