| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2252 |
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| Symbol | |
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| ID | 5080224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 2594815 |
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| End bp | 2597370 |
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| Gene Length | 2556 bp |
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| Protein Length | 851 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640499414 |
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| Product | Ig domain-containing protein |
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| Protein accession | YP_001183772 |
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| Protein GI | 146293348 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.124017 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTCAG TGTATAAGGT TTTTCTTGTA GGATTATGTT CACTTTTCTT CGTTGCCTGT
GGTGGTGGGG GCAGTATTTC CGATGATGGT GGTGGCTCAA CCCCAACACC TGGCGTCATT
ACCGTCAGTC TTACTATTTC AAATACTAAT ATTTCAGCTG CTACACCTGC GACAGTGAGT
GCGAAAGTTG TTGATTCTAA GTTAGGCGTT CTTGCTAATA AACTGGTCAC GTTCACCCTT
GATGATAGTG CATTGGGTGT TTTTCAAACG CTAGAGGATA CGGCATCTAA CGGTGCGGTT
GTGACTGATG CAAATGGGGT TGCATCTCTT AAATTGCTCA CAGCGCAAAA AGCAGGAGGC
GGTGTTATTA CTGCAAAAGT GTCATCAGGT GAGTCTGGAA CGATCCCTTT TATGATGAAA
GGAGACGGCG GTAATGCTGG AGGTGGCCCT CAAGTGACAT TAAAGCTAAC CGACGCTGCA
GGAAATTCAA TTAATAGCAT TACATCGACA ACGCCTGGCA TATTGTCGGC AACGGTGACC
GGACTCACTA AAACCGTGAT AGTGACTTTT GATTCCACAA TTGGTGATTT GCCCGTCAAG
ACGGCCATTA CTGATCTCAA TGGTAAAGCG AGCGTTAATT TATATGCAGG TAGTACACCG
GGTGCGGGGA CTGCAACTGC GTCATTAAGT ACGGGTGAGG TAGGGGAGCA AGTTTTTGTT
GTGGGTGCTA CCAATGTGTT AATGGGAAGT GGCTCGCCTT TTGTTTCGGG TAAGGCTGAT
GTGAGTGCAT TAACCTTATC AGCAGGAGGG ACTGCAACTA TTTCAATCTT ATTACAAGAT
GATCAGGGGA AAGCGTTTAC TGAGCCAGTG GATGTTCGTT TTGCTTCAAC CTGTTCAAAT
AAAGCCAGCC CTGAAGCAAT AATTAGTAGC CCCGTGACCG CGGTGGGTGG GCAGGCTACA
AGTACATATC TTGCCAAAGG ATGTGTGGGT ATTGACAATA TTACGGTGAC CGCGGATGTG
GGTGGCAAAA ATTTGTCAGC GACGGGTAGC ATTACAGTGT TGTCAGCAAG TGCAGGGAGT
GTCGTTTTTG TTGATGCCAC GCCCGAACAT ATTGGTATTA AAGGGACTGG AATTAATGAG
TCTTCTACTT TACGTTTTAG GGTGTTAGAT ACCAACAATA ATCCAGTCGC AAATAAAGCG
GTCAGTTTTA AATTGAATAA TAATTCAGCT GGATTGACGT TAACCCCCGA CACCGCAACA
TCAAACAATC AAGGGTATGT ACAAACAGTG GTTAATTCCG GCACCGTTGC GACAACGGTA
AGGGTTACGG CAAGTATTGA TGGGACTAAC CCATTAATTT CCAGTCAATC CAATGTACTT
GTTGTTTCCA CAGGTAAACC AGATCAAGAC AGTTTTTCAC TCTCAGCTTC CGTTTTTAAT
GTTGAAGGTT GGAATTATGA CGGCGCTAAG GTCACTATTA CAGCCCGTCT AGCCGATGCC
TTTAATAACC CTGTACCTGA TGGAACCGCT GTAGTATTTA CTGCTGAGGG TGGTTCGATA
GAGAGTTCTT GCCAAACACA AAAAGGGGTT TGTTCCGTGG TATGGACAAG CCAGCAACCT
CGTCCTGTGG GGGTTGATGG TAATGGACCA CTTTTTGATG CAAATGGCAA TCAGAACCAA
GATCCTAATG CAATGCTTAG AGCCGAGACC AATTTTGCCA GTAAAACATA TCTGGGAAAT
TATTTTGGTC AGCCCTATGG CGGTAGGGTG ACTATTACTG CCACTGCTAT TGGTGAGGAG
TCATTTCCTG ATTTAAACAG TAACAACATT CTCGATACTG ATAGTGAGTT TAGTTTATTT
GTGGGAACTC CTACGAATTG TGGTCGTGAT AATAGTGGGG ATTGTTATGA TCTTACTGAG
GCATTTGTTG ATCATAATGA AGATGGTATT TATACACCTA AATATCCAAA GAATGGTTCA
ACGGATACTT CTGGTGATCG TGAGACTTTT ACCGATTTTA TTGACCCAGT TAACCCGACA
GGACAAGGTG TCTTTGATTT AGCCGACGGA GAGTACAGTG GTGTGTTATG TGACAATTCC
GCTGCGGCAT CAGTCAAATG CAGTCCGCAA GCATCCATCT CCGTACGCCG CTCACTTGTA
TTAGTGATGT CAGGAAGTGA TGCGATTGCC ACTCGTGCTG AAAATACCTT AATTGCCGAT
GCTATTCCCA ATAATGGGCA GATTGATATT GCGATTAAAG GCACTGCCTC CGTGATGTTT
ACTATTGCTG ATATCAATAA TCAACAAATG CCTGCTGGAA CTGTGGTGAA CTTTAAAGCA
ACGGGCGCGA CGGTGACAAG TTCAACGAGT TACACATGGC CGAGTACAAA TTATAACGGT
GGCCGTCAGT TTGTGGTTAG CTTAAAAGGT GGCGATCAAG CTGATTCAGG AAATCTAATC
GTCACAGTTA CCACTCCGGG TGTAAAAGAT GCGCAGGGAG GGGATATTGC TGGAACAACA
ACGGAGGTAT TAAATATTCC TATTCTTGTG AGATAG
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| Protein sequence | MKSVYKVFLV GLCSLFFVAC GGGGSISDDG GGSTPTPGVI TVSLTISNTN ISAATPATVS
AKVVDSKLGV LANKLVTFTL DDSALGVFQT LEDTASNGAV VTDANGVASL KLLTAQKAGG
GVITAKVSSG ESGTIPFMMK GDGGNAGGGP QVTLKLTDAA GNSINSITST TPGILSATVT
GLTKTVIVTF DSTIGDLPVK TAITDLNGKA SVNLYAGSTP GAGTATASLS TGEVGEQVFV
VGATNVLMGS GSPFVSGKAD VSALTLSAGG TATISILLQD DQGKAFTEPV DVRFASTCSN
KASPEAIISS PVTAVGGQAT STYLAKGCVG IDNITVTADV GGKNLSATGS ITVLSASAGS
VVFVDATPEH IGIKGTGINE SSTLRFRVLD TNNNPVANKA VSFKLNNNSA GLTLTPDTAT
SNNQGYVQTV VNSGTVATTV RVTASIDGTN PLISSQSNVL VVSTGKPDQD SFSLSASVFN
VEGWNYDGAK VTITARLADA FNNPVPDGTA VVFTAEGGSI ESSCQTQKGV CSVVWTSQQP
RPVGVDGNGP LFDANGNQNQ DPNAMLRAET NFASKTYLGN YFGQPYGGRV TITATAIGEE
SFPDLNSNNI LDTDSEFSLF VGTPTNCGRD NSGDCYDLTE AFVDHNEDGI YTPKYPKNGS
TDTSGDRETF TDFIDPVNPT GQGVFDLADG EYSGVLCDNS AAASVKCSPQ ASISVRRSLV
LVMSGSDAIA TRAENTLIAD AIPNNGQIDI AIKGTASVMF TIADINNQQM PAGTVVNFKA
TGATVTSSTS YTWPSTNYNG GRQFVVSLKG GDQADSGNLI VTVTTPGVKD AQGGDIAGTT
TEVLNIPILV R
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