| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2240 |
|---|
| Symbol | |
|---|
| ID | 5080212 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 2577867 |
|---|
| End bp | 2578340 |
|---|
| Gene Length | 474 bp |
|---|
| Protein Length | 157 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640499402 |
|---|
| Product | MarR family transcriptional regulator |
|---|
| Protein accession | YP_001183760 |
|---|
| Protein GI | 146293336 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGGCGC ATAGAGAAAG TGAAAACGCG TTAAACCTTT GTGGTAGGAG GTGCTGTTTG
AATCGTCATG AAAGCTTAGG CTATCTTGTA TCCCACTTAA ATATCGAGCT GCAAAATGAG
CTTGATCTGC ATCTTAAGCG ATATCAACTC GATATAAAAC TGTGGCCTGT GCTGTTTGCT
TTATGGCAAG AAGAGGGTAT AAGCCAAACT GAATTGTCTA AGCGTTGCGA TGTGGCAAAT
TACACTATGA CGCGCTTACT CGATCAGTTG CAGGTGCAAG GTCTTATTAC TCGCCATCAA
GAAGTCGATA ATCGGCGTGC TTTTCAAATC TTTTTGACCG ATGAAGCCAA AGCATTAGAG
CAAGATCTTA TCTGCGAAGC TGAGCGGGTT AATGAAAAAT TCCTGTCAAA TTTAAGTGAA
GATGAACAAC AGCTATTCAT TTTACTATTG AATAAAATCA ACCGCTTGGC TTGA
|
|---|
| Protein sequence | MMAHRESENA LNLCGRRCCL NRHESLGYLV SHLNIELQNE LDLHLKRYQL DIKLWPVLFA
LWQEEGISQT ELSKRCDVAN YTMTRLLDQL QVQGLITRHQ EVDNRRAFQI FLTDEAKALE
QDLICEAERV NEKFLSNLSE DEQQLFILLL NKINRLA
|
|---|
| |