| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2236 |
|---|
| Symbol | |
|---|
| ID | 5080208 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 2574112 |
|---|
| End bp | 2575251 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640499398 |
|---|
| Product | cupin 4 family protein |
|---|
| Protein accession | YP_001183756 |
|---|
| Protein GI | 146293332 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2850] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.817609 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATACAC TCAATCTCGA TATCGCCCAG TTTCTTAGTG AATACTGGCA AAAGAAACCC
CTGTTGATCA AAAAAGCATT TCCGCAGTTT GAAGATCCAA TCAGCGCCGA CGAACTAGCA
GGCCTTGCCT GTGAAGAAGA AATCTCTTCA CGCATCGTTG TCACCAAAGA CAATGATTGG
GAAGTAGTGC AAGGTCCGTT TGAAGATTAC GACAGCTATG GCGAAACCCA TTGGCAGTTA
TTAGTGCAAG CAGTCAACCA TTGGTATCCC GATTCGCAGC CATTAGTTGA AGCGCTGCGC
TTTTTACCTG ACTGGCGCTT CGATGACTTG ATGGCCTCAT TTGCAACCCC AAGTGGCGGT
GTTGGGCCTC ACGTCGATAA CTACGATGTG TTTATCATTC AAGGCGAAGG TGAGCGTCGC
TGGACTGTGG GTGACAATAC TCCGCAACAA CGCCGCGGTG GCAATCCAAA CTCACCGCTG
GTTGAAGACT TCACACCCAT TATCGATGTG GTGTTAGAAA AAGGCGACAT GCTTTATATT
CCACCTGGTT TCCCACACTG CGGCGAAACC CTAACTGTGG CAATGAGTTA CTCGATTGGT
TTCCGCGCTC CTAGCCAGCA AGAATTGGTC AGTGAAGTCG CCGATTATTT GCTCGATAAT
AACTTAGGTC AGCAGCGTTT CACGTCGCAA ACGGAACCGA GTTCAGCGGG TATCGTCAGC
CAAGATCATC AAGTGGGCAT AATGTCACTC TTGAGTCAGC TGAGCCAAGA TCCCAATAGC
TACCAAATCG TGTTAGGTAA GTTGCTTAGT CAAAACCGTT TCGAGCTTGA TTTGTGTGAA
GGCGAAGAAG CTTACAACAT AGAAGATTTG CAAGATGCCT TCGCCCAAGG TGCTGGCGTC
AGCCGTATCG GCGGTTTGAA AGTATTGCGC CTTGAAAATG ACGCCACGCC GCGATTATTC
ATCAATGGTG ATGTACACGA ACTGCCCCAA ACACCAGCGG ATGTTATCGC ACAGTTGAGC
GATAACGTCA GCTTAAACGC CGATGAAGCG ACTAAAATAT GTCAGCATGA AGAAGTCCAA
GCCTTACTGT TGAAACTCAT CAATCAAGGT TTCTATTACT TGAGCGACAG CGAAGAATAG
|
|---|
| Protein sequence | MYTLNLDIAQ FLSEYWQKKP LLIKKAFPQF EDPISADELA GLACEEEISS RIVVTKDNDW
EVVQGPFEDY DSYGETHWQL LVQAVNHWYP DSQPLVEALR FLPDWRFDDL MASFATPSGG
VGPHVDNYDV FIIQGEGERR WTVGDNTPQQ RRGGNPNSPL VEDFTPIIDV VLEKGDMLYI
PPGFPHCGET LTVAMSYSIG FRAPSQQELV SEVADYLLDN NLGQQRFTSQ TEPSSAGIVS
QDHQVGIMSL LSQLSQDPNS YQIVLGKLLS QNRFELDLCE GEEAYNIEDL QDAFAQGAGV
SRIGGLKVLR LENDATPRLF INGDVHELPQ TPADVIAQLS DNVSLNADEA TKICQHEEVQ
ALLLKLINQG FYYLSDSEE
|
|---|
| |