Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2227 |
Symbol | |
ID | 5080349 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 2563351 |
End bp | 2565618 |
Gene Length | 2268 bp |
Protein Length | 755 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640499389 |
Product | ATP-dependent Clp protease, ATP-binding subunit clpA |
Protein accession | YP_001183747 |
Protein GI | 146293323 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0179125 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTGAACA AAGATCTGGA AGTCACCTTA AATCTGGCGT TTCAGCAAGC CAGAGACGCG CGTCACGAGT ATATGACAGT GGAACATCTG TTATTAGCTC TCATCGACAA TCCAGCGGCT CAAGAAGCGT TAATCGCCTG TGGAGCGAAT CTAGATAAAC TCAGAGATGA AGTGGCAAGC TTTATCCAAC AAACAACCCC AATCATTGCC GATATTGATG ATGACAAAGA AACTCAGCCG ACGCTTGGGT TCCAGCGAGT GCTGCAACGG GCAGTATTCC ATGTGCAGTC ATCGGGCCGC AATGAAGTGA ACGGCGCTAA CGTTTTAGTC GCTATTTTCA GCGAACAAGA ATCCCAAGCC GTGTACTTGC TGCGCCGTTG CGATATTAGT CGCCTAGACG TAGTGAATTT TATTTCCCAT GGTTTCGCCA AAAATGATGA TGCTGAGTCA CATCAAGATC AAGAACGCAT AGAAGATCAA AGTGAAGGCA GTGAAGAACG CAGCATGTTG TCGCAATTTG CGGCCAACTT AAACCAACTT GCAAAGCAAG GGATTATTGA TCCACTGATT GGCCGCGATC AGGAAATTGA GCGCGCGATT CAAACCCTGT GCCGTCGCCG TAAAAATAAT CCACTGTTAG TGGGTGAGGC GGGTGTGGGG AAAACGGCGA TTGCCGAAGG GCTGGCGTAT CGGATTGTGA ATAAACAAGT GCCCGATGTA ATGCTTGAAG CCACGGTATA TTCCTTGGAT TTAGGTTCAT TGCTTGCAGG CACTAAGTAT CGCGGCGACT TTGAAAAACG CTTTAAGAAT CTGTTAAAAG AACTGGCGGC GGATAAGCAT GCCATCCTAT TCATCGATGA GATCCACACC ATTATCGGTG CGGGCGCGGC CTCTGGCGGC GTAATGGATG CCTCTAATCT GCTGAAACCT TTGCTATCTA GCGGTAATTT GCGCTGCATG GGCTCGACGA CTTTCCAAGA ATATCAAAGT ATTTTTGAGA AAGACCGTGC GCTGGCACGT CGTTTCCAAA AGGTGGATAT TAATGAGCCT TCAGTGGAAG AAACCACTAA GATTTTGATG GGGCTTAAGT CTAAATACGA AGAATATCAT GGCGTTCGTT ATACTCAGGC CGCGATTAGC AGCGCTGCAG TATTATCGGC CAAGCACATT AATGACAGAC ATTTACCCGA TAAAGCTATC GATGTTATCG ATGAAGCGGG GGCTCGTATG GTGATGTTGC CTATGAGCAA GCGTAAAAAG ACCATAGGCC AAGCCGAAAT TGAGTCCATT GTAGCTAAAA TGGCGCGCAT CCCTGAGAAG TCAGTATCTG CCACAGATAA GGACTTACTG CGTAATCTTG AGCGTAACCT TAAGATGGTG GTCTTTGGTC AAGATAAAGC CATTGAGACC TTAAGCTCAG CCATTCGTTT ATCGCGAAGT GGTTTGGGCA CAGATAAAAA ACCTGTCGGC AGTTTCTTAT TCGCCGGTCC CACTGGTGTG GGTAAAACCG AGGTTACCAA TCAACTGGCT ACCTGTTTAG GGATGAAACT GGTGCGCTTT GATATGTCGG AGTACATGGA AAGCCACACA GTGTCACGCT TAATTGGGGC ACCTCCAGGT TATGTGGGTT ATGACCAAGG TGGATTGCTG ACAGATGCTG TGATTAAAAA TCCGCACTGT GTCGTGCTAT TGGATGAAAT TGAGAAGGCC CACCGTGATG TCTATAACTT GCTGTTGCAG GTGATGGACC ACGGCACTTT GACCGATAAT AATGGTCGTA AGGCTGACTT CAGACACGTG ACTTTGGTGA TGACCACTAA CGCGGGGGTA CAGGAGACTA TTCGTAAGTC GATTGGCTTT ACCCAGCAAG ATCATACCCA AGATGCGTTA TCTGAAATTA ATCGAGTATT TTCGCCAGAA TTTCGAAATC GTCTCGATTC CATCATTTGG TTCAACCATT TGGATATGAC GATTATTGCC AAAGTGGTCG ATAAATTCTT GGTGGAATTA CAGGCTCAGT TGGATGCAAA ACACGTCATC TTGGACGTCA GCGACGAAGC CAGAACCTTA CTCGCCGAGA AAGGCTACGA TAAGAACATG GGCGCGCGTC CAATGGCTCG GGTCGTGACC GAATTGATCA AACGTCCATT AGCGGATGAG ATTTTATTTG GTGCCTTAGA GTCGGGTGGT GTGGCTTACG TGGATGTCAA AGAGGGTGAA ATTGCTATTC GCACAGAGCG TCATGAAAAA GTGGCTTCTA AGGCTTAA
|
Protein sequence | MLNKDLEVTL NLAFQQARDA RHEYMTVEHL LLALIDNPAA QEALIACGAN LDKLRDEVAS FIQQTTPIIA DIDDDKETQP TLGFQRVLQR AVFHVQSSGR NEVNGANVLV AIFSEQESQA VYLLRRCDIS RLDVVNFISH GFAKNDDAES HQDQERIEDQ SEGSEERSML SQFAANLNQL AKQGIIDPLI GRDQEIERAI QTLCRRRKNN PLLVGEAGVG KTAIAEGLAY RIVNKQVPDV MLEATVYSLD LGSLLAGTKY RGDFEKRFKN LLKELAADKH AILFIDEIHT IIGAGAASGG VMDASNLLKP LLSSGNLRCM GSTTFQEYQS IFEKDRALAR RFQKVDINEP SVEETTKILM GLKSKYEEYH GVRYTQAAIS SAAVLSAKHI NDRHLPDKAI DVIDEAGARM VMLPMSKRKK TIGQAEIESI VAKMARIPEK SVSATDKDLL RNLERNLKMV VFGQDKAIET LSSAIRLSRS GLGTDKKPVG SFLFAGPTGV GKTEVTNQLA TCLGMKLVRF DMSEYMESHT VSRLIGAPPG YVGYDQGGLL TDAVIKNPHC VVLLDEIEKA HRDVYNLLLQ VMDHGTLTDN NGRKADFRHV TLVMTTNAGV QETIRKSIGF TQQDHTQDAL SEINRVFSPE FRNRLDSIIW FNHLDMTIIA KVVDKFLVEL QAQLDAKHVI LDVSDEARTL LAEKGYDKNM GARPMARVVT ELIKRPLADE ILFGALESGG VAYVDVKEGE IAIRTERHEK VASKA
|
| |