| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2111 |
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| Symbol | |
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| ID | 5078316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 2424967 |
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| End bp | 2428722 |
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| Gene Length | 3756 bp |
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| Protein Length | 1251 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640499273 |
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| Product | exodeoxyribonuclease V, beta subunit |
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| Protein accession | YP_001183631 |
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| Protein GI | 146293207 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | [TIGR00609] exodeoxyribonuclease V, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGAGTA CACACACGAC AACCCAAACG CCAACAGTAC AACATCAGGC TGAGGCACTT
AACCCACTGA CATTGCCCTT TGGCGGCAGT CGGCTGATAG AAGCCAGCGC AGGAACGGGT
AAAACCTATA CTATTTCAGG TCTTTATCTG CGTTTACTCC TAGGTGATGG CATCGATACC
CCTTTAACCT GTGAACAAAT TTTAGTGGTC ACCTTTACCA ATGCCGCAAC TGAAGAATTA
AGGGATCGTA TTCGTCGCCG CATTCAAGTC GCCTTTAAGT GTTTTTTAGG CTTGCCGATT
GAGGATCCCT TTGTACAAGC ACTTTACGAC AACACGCCTG TTGATGAACG CTCAATTGCC
CTTAGGCGTT TCGATTTAGC ACTAAAATCC CTCGACGAAG CCGCGATTTT TACTATTCAC
GGTTTTTGCC AGCGCATTTT GTCGGATCTT GCCTTTGAAT CATCCCTGCT TTTCGAGTCA
GACTTTACCT TAGATGATAG CGAATTCCTG CACCATGCTG TGCGGGATTT TTGGCGTGAG
GCTTGTTATC CCTTACCAGA CTACTTAGCC CAAGTTATCG CAAAAGAGTT TGGCGAGCCC
GACGGTTTAA TCAAACAACT GCGGCCATTA CTGGGGGCGA GCCAAGCGCA ACCGCTTAGC
CCAACAGCAA ACTTTACCAC CTTAGCGCAA TCCCTCAGCC AGAGTTTAGA ACGCTTCAAG
TTAGCTTGGC CCCGTGGCCG TGATGGATTA CTCGAGTTAT TGCATAACTT GCCACTTAAT
GGCACGCGAT TTGGCAAGCC AAGTGATCAT TATCCCAAGC TTGCCGCGAT GTTCGATGCC
TTAGATAATT GGCTTGCCTA TGGAAATGGT CTACCGCCCA TAAAAGTATT GGAGGATTTA
TCCCTATCGG AACTTAAGCT CAATAAAGGC GGCGTGCTCC CAAGTGTAAG CGAAGCTCCC
TTACTGGATC ATATGGAGCA ATTGGCGGCA CTCATTAAAG CCGTTAAACC CGCGTTTTTG
TATAGTGCTA AACAGGGGAT TAGCGCGCGT TTTGCAAAAC AAAAACAACA ACAAAATGTA
TTGACGCCCG ATGACCTACT CACCACCTTA GCCGAAGCAT TAAATGCCAA CCGTCAGACC
TTACCCAAAG CGGTAGCAAG TCGTTTCCCT GTGGCATTGA TTGATGAGTT TCAGGACACA
GATCCCCTGC AATTTGCTAT TTTTTCAAGC ATTTATCAAC CCCATCACGC ATTCAATTTA
CCAACTGATA ATCACCTTAA TCATGCTGAA AACAACCTCA GTCTATTGAT GATTGGCGAT
CCTAAACAGG CGATTTATGC TTTTCGTGGC GCCGATATCT ATACCTATAT CGAGGCTCGC
AAAGCCACTG AAGCCCACTA TCACTTAGAT ACAAACTACC GCTCAAGCAC CAATATGGTC
GCTGGCGTTA ACCATTTATT TAATCGACAT CCCGATCCTT TTATCAGTCA ATCGATTCCC
TTTGACAGCG TCAAAACACC CAGTAGCGCG AAGCATAAAA TATTAACCGA GCCAAGTGAA
AATCCCGCTG CGCTCAGAGT AAGACTATTA AGTGAAACCG AAAATGGCCT AAATAAAACC
ACGGCAAGGC ATCGACTCGC TAACGATGCC GCGGCAGAAA TTACCCGTTT GTTAACGAGT
GCCGCCCATG GTGAATGCTA TACTCCTAAA GGGCCATTAA TGGCTAAAGA CATTGCCATA
TTAGTGCGTG ATCGTAACGA AGCCGCGGTA ATGAAAGCAG CACTCAGTCA GCGCCAAATC
GGTGCTGTGT TTTTAAGTCG CGACAGTGTA TTCGATACCC TTGAAGCGCG AGAAATGTCG
TTGATCCTAC GCTCACTGGC AAACCCCAAA GATGAGCGCG CACTGCGAAG CGCCCTCGCC
ACGGCATTAC TTGGTTACAA CGCTGAACAA ATTCATGCAT TTAACCAAAA TGAAGAGCAG
AGACAACAAC TGTTAGAACA GTTTTTTGAT TTACACACTA TCTGGCAAAA ACGCGGCATC
ATGCCGGCAC TGCTCAGTCT TGCCAATAGT ACGTCACTTA TCGAACGTTT GCTGCACGCT
CCTCAGCCCA AGTTGGATAA CAATCAAGAG CAAGAAACAA CATACGGTGA ACGGCGCTTG
ACCGACTTTC GTCATTTAGC TGAACTATTA CAGCAAAAGG CCACGGAACT CGACGGGATA
AGTGCCCTAC TCAATTGGTA TGAACAACAA CTTATTGATA ATACAGGAAC AGATGAACAA
CAGCTTCGCC TAGAAAGCGA GCAGAATTTA GTGCAAATCG TCACTATCCA TAAAAGTAAG
GGACTCGAAT ACCCCGTTTG TTTCGTGCCC TTTGTCAGTC TGGCGCGGGA CAATCGCCGT
CGCCCAACAC CTATGCTTTA CCACAAAATA AACCAGACTC ATGGGCAAGC GTTAGTGTGG
GATATTGAAG GAACAGAGGA AGGCTGGGAG CAGTTTAGGC AAGAAACCTT GGCCGAAGAT
CTCCGGCTAT TGTATGTGGC ACTCACTCGG CCTGTGTATC TGTGTTACTT GTATATCGCT
AACCACAGCC GTCAACTCAA AAATGGCCTT AAAAGTCAGC TCCATGAAAC CGCTATTGGC
TATCTTCTGG GGATCACCGA TGCCGATTGT GATTTTAACC GTATCAGCCA AGCAGCACAA
AATCTTGCCC AACGTATTGA TGCGATTAGC ATTGATAAAA TACCAGAAGA AACTAGCCTG
CAAACATTGC CATCAAGCCA TGATGCAACC CAAACACTCG CCCCCAAAAC AATCCATCGC
CAGTACAGTA CACCTTGGCG AGTCGGCAGT TATTCTGGTT TAGTGAAAAA TACCAGCCAC
GGTAAAGCCG CGCCCGGTGC CGATGATGAA GCGCTCAGCG TCTTAGAACA AGGTGTTGCA
TCACGCGACC AACTTGAAAC CGATAACAGC TTAGATCCTA AGCCATTTGG GCTTAATCGC
TTTAACTTTG AGCGCGGCGC AAACGCAGGG AGTTTTATGC ACTTAGTGCT CGAGCTAATT
GATTTTACAA AGGCAGAGTT CGATTTACCT GAGCAACTTC CTAAAGCCAT GCTGCAATAT
GGTATCGCAG CCGAATGGGT AGACGTCTTG CATGCTTGGT ATCTTGATAT CCTCAAGGCA
CCCCTTGCAC TGATGCCCGC TGAAGCCGAA GCGACGACTC CACTTATCAA TCCAAAGCTG
TGTTTGGCCA CATTATCAAA ACAAGATACC TTAGTTGAAA TGGAGTTTTA TTTACCCCTT
AACGCGCTAA AAGATACACA GCTTAATGCG TTATTGAATC AGTTTGGTTA TAGGTCAACC
CTTAAATTTG ATGATCTTCA AGGTATGCTG AAAGGTTTTA TTGACTTAAC CTTTGAATAT
GAAGGTAAAT TTTACATTGC TGACTATAAA TCCAACCATC TCGGTGATGA TATATATGCC
TACCATCAGG CGGCTCTTCA GGGAGCAATT AAAGAACATC ACTATGATTT ACAGTACATT
CTTTATTCCC TCGCCCTGCA CAGATACTTA CGATTGCGCC TGCCCGCATA TGATTATGAC
ACCCATATAG GGGGTTGTTA TTATTTGTTT TTAAGGGGAA TGTCTGCTCA ATATCCTGGC
TATGGTATTT ATTATGATAA ACCGCCTAAG GCACTGATCT ATGCGCTGGA TGCTTTATTT
GATAACCCAT TTATCGACAC TGGAGTTACG GTATGA
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| Protein sequence | MLSTHTTTQT PTVQHQAEAL NPLTLPFGGS RLIEASAGTG KTYTISGLYL RLLLGDGIDT
PLTCEQILVV TFTNAATEEL RDRIRRRIQV AFKCFLGLPI EDPFVQALYD NTPVDERSIA
LRRFDLALKS LDEAAIFTIH GFCQRILSDL AFESSLLFES DFTLDDSEFL HHAVRDFWRE
ACYPLPDYLA QVIAKEFGEP DGLIKQLRPL LGASQAQPLS PTANFTTLAQ SLSQSLERFK
LAWPRGRDGL LELLHNLPLN GTRFGKPSDH YPKLAAMFDA LDNWLAYGNG LPPIKVLEDL
SLSELKLNKG GVLPSVSEAP LLDHMEQLAA LIKAVKPAFL YSAKQGISAR FAKQKQQQNV
LTPDDLLTTL AEALNANRQT LPKAVASRFP VALIDEFQDT DPLQFAIFSS IYQPHHAFNL
PTDNHLNHAE NNLSLLMIGD PKQAIYAFRG ADIYTYIEAR KATEAHYHLD TNYRSSTNMV
AGVNHLFNRH PDPFISQSIP FDSVKTPSSA KHKILTEPSE NPAALRVRLL SETENGLNKT
TARHRLANDA AAEITRLLTS AAHGECYTPK GPLMAKDIAI LVRDRNEAAV MKAALSQRQI
GAVFLSRDSV FDTLEAREMS LILRSLANPK DERALRSALA TALLGYNAEQ IHAFNQNEEQ
RQQLLEQFFD LHTIWQKRGI MPALLSLANS TSLIERLLHA PQPKLDNNQE QETTYGERRL
TDFRHLAELL QQKATELDGI SALLNWYEQQ LIDNTGTDEQ QLRLESEQNL VQIVTIHKSK
GLEYPVCFVP FVSLARDNRR RPTPMLYHKI NQTHGQALVW DIEGTEEGWE QFRQETLAED
LRLLYVALTR PVYLCYLYIA NHSRQLKNGL KSQLHETAIG YLLGITDADC DFNRISQAAQ
NLAQRIDAIS IDKIPEETSL QTLPSSHDAT QTLAPKTIHR QYSTPWRVGS YSGLVKNTSH
GKAAPGADDE ALSVLEQGVA SRDQLETDNS LDPKPFGLNR FNFERGANAG SFMHLVLELI
DFTKAEFDLP EQLPKAMLQY GIAAEWVDVL HAWYLDILKA PLALMPAEAE ATTPLINPKL
CLATLSKQDT LVEMEFYLPL NALKDTQLNA LLNQFGYRST LKFDDLQGML KGFIDLTFEY
EGKFYIADYK SNHLGDDIYA YHQAALQGAI KEHHYDLQYI LYSLALHRYL RLRLPAYDYD
THIGGCYYLF LRGMSAQYPG YGIYYDKPPK ALIYALDALF DNPFIDTGVT V
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