Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2102 |
Symbol | |
ID | 5078307 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 2410395 |
End bp | 2411018 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640499264 |
Product | putative sulfite oxidase subunit YedZ |
Protein accession | YP_001183622 |
Protein GI | 146293198 |
COG category | [S] Function unknown |
COG ID | [COG2717] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0694492 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGAGAT TAACGGCGAA GCATGTCATT TGGCTTAAGA GTGTGTTCCA CTTAATCGGT GTTATACCTA TTGCCTATTT AGTTATCCTA GTCACAACGG GTCGCGCGGG TGGCGATCCG GTCCAGTACA TCATTCACTT TACTGGAATG GGCGCACTCA ATGCATTAGT GGCGACCTTA CTTATCTCAC CCATTGCTAA GCTCACTAAA CAAGGTGTAT TAATGCAAAC CCGCCGTTTA GTCGGCTTAT ATGTATTCGC CTATGCTACC TTGCATATTC TGGCTTTTTT TAGCTTGGAT TTGCTGTTTG CTTGGGGCCT TTTGTTGAGT GAAGTAGTGA AGCGCCCTTA TATCCTAGTG GGTGCCTTTG CTTATCTTAT CTTAGCAACA TTAGCCGTAA CCTCGTTTAA GGCATTAATG CGTCGAATGG GGCGTCGCTG GCAAATAATC CACAATGGCG TGTATTTGGT TGCCATACTC GCACCAATTC ATTTTTATTG GTCGGTTAAA TCGGAAATTA TTGAACCGAG TTTATATCTT GTGGGGTTTT GTTTGTTATT GCTATGGCGG CTACCATTGA AGCGTGTTGG ACGGGATATT ACAGACGGGA AAATGGCAAA ATAA
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Protein sequence | MLRLTAKHVI WLKSVFHLIG VIPIAYLVIL VTTGRAGGDP VQYIIHFTGM GALNALVATL LISPIAKLTK QGVLMQTRRL VGLYVFAYAT LHILAFFSLD LLFAWGLLLS EVVKRPYILV GAFAYLILAT LAVTSFKALM RRMGRRWQII HNGVYLVAIL APIHFYWSVK SEIIEPSLYL VGFCLLLLWR LPLKRVGRDI TDGKMAK
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