| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2072 |
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| Symbol | |
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| ID | 5079498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 2369994 |
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| End bp | 2370662 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640499234 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001183592 |
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| Protein GI | 146293168 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000098787 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTGT CACAGGTTAA AGCAGTACTG TTTGATCTTG ATGGTACGCT TGCCGATACC
GCGCCAGATC TTGTGCAGGC ACTGAACTTA AGTCTCTGTG ACGCGGGGAT TGAAGCAAAA
CCCTTCGAGC TATTACGCAG CGCCGCTTCC CACGGCAGTT TTGCCTTAGT TGATGCCGCG
CTCCCCAATG CTGATGAGTC CCTGCGTATT CAAATCCAGC AAGGGCTACT CGCCCACTAT
CAACGTATTA ATGGCGACTA TTGTCGATTA TTTACCGGTA TGGATGTATT GCTCGACTGG
CTTGAACTAC AGCAACTGCC ATTTGGCGTT ATTACCAATA AACCAGCGCG CTTTACTCGC
CCGCTGGTTA AAAAACTGAA TTTGCACCAG CGGATGCAAG TTGTTATCAG CGGCGATTCA
ACCCGCTATG CTAAACCCCA TACGGCGCCT ATGTTACTGG GTGCGCAGCA GCTTAACTGC
GCCCCTGAAC ATATACTGTA CTTAGGAGAT GCTGAACGAG ATTTACTCGC CGCCAAAGCG
GCAGGTATGG TCGGCGGTGT GGCATTATGG GGTTATCTAG GGGAAGAAGA TAAACCACAA
AATTGGCCAG CATTGGCACA ATTTAGTTCA CCTTTGGCTG TCCATCAGGC TTTAGTTGCA
ACCCGTTAG
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| Protein sequence | MSLSQVKAVL FDLDGTLADT APDLVQALNL SLCDAGIEAK PFELLRSAAS HGSFALVDAA
LPNADESLRI QIQQGLLAHY QRINGDYCRL FTGMDVLLDW LELQQLPFGV ITNKPARFTR
PLVKKLNLHQ RMQVVISGDS TRYAKPHTAP MLLGAQQLNC APEHILYLGD AERDLLAAKA
AGMVGGVALW GYLGEEDKPQ NWPALAQFSS PLAVHQALVA TR
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