Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2029 |
Symbol | ampC |
ID | 5078234 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 2313524 |
End bp | 2314708 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640499191 |
Product | beta-lactamase |
Protein accession | YP_001183549 |
Protein GI | 146293125 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACAAC ATCCCCTACT CGCTTCAATG CCATTATTAA GCAGCGTACT GCTCAGTGTA ACGCTATTTT CTAATGTGAG TGCAGCCCAA GCTTTAAATG CTAAGGAAAT GCAATCGCTG GTAGATTCTG TGGTTAAACC TTTGATGACT GAGTACCATA TCCCCGGTGC CGTAATAGGC TTAACTATTG ATGGTAAACA GTATTTTTAT CGATATGGCG TCAGTTCTAA AACCTCTGGG CAAAGTGTGA CTGAACATAC CCTGTTCGAG ATTGGCTCTA TCAGTAAAAC CTTTACCGCG ACACTGGCAA ACTACGCACA GCTTAAAGGC AAATTAACTC TCACGGATAT GGCCAGTGAC TATGTACCAG CATTAAAAGG CAGTCATTTT GATGGGATTA GTCTCATTAA CTTAGCGACT CACACCGCGG GAGATCTGCC AATGCAAGTA CCCGATAAAG TCACTAACAA CGCAGAATTA ATGGCTTATC TTAAACAGTG GCAACCGTCA TTTGCCCCAG AGACCCACAG AAATTACGCC AATCCAAGCA TTGGCCTGCT CGGGATGATT GCCGCGCAGA GTTTGAATCA AACATTTCAG CAAGCACTTG AACAAACAAT CTTTCCGCAA TTGGGTATGA CCAGCAGCTA TGTCAAGGTT CCCAGCGACA AAATGGCCGA TTATGCCCAA GGCTACAATA AGCAAGATAT GCCGGTTCGG GTCAATCCCG GCGTATTAGC CGATGAAGCC TATGGCGTTA AAACTACAGC CACAGATCTG CTGCAATTTG TGGAAGCCAA TATGCAAATG CACCCACTTG CCAAACCTCT GCAAACGGCA ATCGATGAGA CTCACAGGGG ATACTTTGAT GTGGGCGTAA TGACCCAAGA TATGATTTGG GAACATTATT CCTATCCGAT TGAGCTCGAT AAGCTACTTA TGGGCCACAC TCAGGAAGTG GTGTTTGGTA GCACGCCCGT TAACCCCATA GTGCCACCCC TTGAACCGCA GCAAAATGTG TGGATCAATA AAACAGGCTC AACCGGTGGT TTTGCCGCCT ATATCGCCTT TATCCCCGCA CAAAAGCTTG GGATCGTCTT ACTAAGCAAT AAAAATTATC CCGTTCCACC ACGGGTGACT GTGGGCTACC AGATTTTAAC TGGCATAGAA AGATTGCAAA AATAG
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Protein sequence | MQQHPLLASM PLLSSVLLSV TLFSNVSAAQ ALNAKEMQSL VDSVVKPLMT EYHIPGAVIG LTIDGKQYFY RYGVSSKTSG QSVTEHTLFE IGSISKTFTA TLANYAQLKG KLTLTDMASD YVPALKGSHF DGISLINLAT HTAGDLPMQV PDKVTNNAEL MAYLKQWQPS FAPETHRNYA NPSIGLLGMI AAQSLNQTFQ QALEQTIFPQ LGMTSSYVKV PSDKMADYAQ GYNKQDMPVR VNPGVLADEA YGVKTTATDL LQFVEANMQM HPLAKPLQTA IDETHRGYFD VGVMTQDMIW EHYSYPIELD KLLMGHTQEV VFGSTPVNPI VPPLEPQQNV WINKTGSTGG FAAYIAFIPA QKLGIVLLSN KNYPVPPRVT VGYQILTGIE RLQK
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