Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1945 |
Symbol | |
ID | 5078393 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 2230560 |
End bp | 2231753 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640499106 |
Product | aromatic amino acid aminotransferase |
Protein accession | YP_001183467 |
Protein GI | 146293043 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1448] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTTTCT CTCAAGTAGT ACTCGCTCCT GCAGATCCAA TCCTTGGTTT AACAGATACC TTTAAGGCAG ATCCTCGCCA AGATAAAGTG AACCTTGGGG TGGGCATTTA TAAAGATGAA GCAGGACAGA CCCCCGTATT AGCGTCTGTT AAAAAGGCCG AGGCATTGCT TCTTGAGCAA GAAAAGACAA AAAACTATTT AGGTATTGAA GGCGTTATTG CCTATAACCG CGTTGTACAA GAATTATTGT TTGGAGAATC GAGTGAGCTA GTTGCTTCTG GCCGCGCCGT TACCGCACAG GCCCCTGGGG GTACTGGTGC ATTGCGTATT GCCGCTGAGT TCTTATTGCG TAATACACCC TCTCGTACCG TGTGGGTCAG TAATCCTACT TGGGCTAATC ATCAAAATAT TTTCGAAACG GCGGGTTTGA CCGTTAGAGA ATACGGTTAC TACAACGCAA ATGCTCACGA TATTGATTTC GATGCCATGA TGACAGATAT CTCGGCTGCA AATGCAGGCG ATATCATTCT ACTACATGGT TGCTGCCATA ATCCGACGGG GATTGATTTA ACCTTGGCTC AGTGGGACTT AGTTGCACAA TTATGTGCAG ATAAGAAACT GGTTCCCTTG TTCGATTTTG CCTATCAAGG TTTTGGAGTC GGGATAGAAG AAGATGCGGC AGGTTTACGT TTAGTGGCAT CTAAGGTGCC TGAATTGCTT ATTGCTAATT CTTTTTCTAA AAACTTTGGT TTGTACAATG AACGTATTGG CGCTGTAACA GTGGTTGCCG AAAATGCAGA TGCGGCTGAA CGTGCTTTCA GCCAAGTGAA ACGTACTATC CGTGCAAATT ACTCTAACCC TCCTGCACAT GGAGCCTTGA TTGTTAGCAC GATTTTAGGC GATGCATCCT TAAAAGCGCA GTGGGTACAA GAAGTCACTG AAATGCGTGA ACGTATTGCG AAAATGCGCA CGCTGTTTGT TGATAGTTTA AAGGCCGAAG GTGTGACGCA AGACTTTAGT TTTATTTCTC GACAAAGTGG TATGTTTAGT TTTTCAGGTT TAAATAAAGC ACAAGTTGCA CGCCTCAAAG ATGAGTTTGG TGTCTATATT GTTGGCTCAG GACGCATCAG TGTTGCTGGA ATGACGAAAA CAAATATGCC AGTGATTTGT AAAGCTATCG CTCAAGTGAT TTAA
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Protein sequence | MIFSQVVLAP ADPILGLTDT FKADPRQDKV NLGVGIYKDE AGQTPVLASV KKAEALLLEQ EKTKNYLGIE GVIAYNRVVQ ELLFGESSEL VASGRAVTAQ APGGTGALRI AAEFLLRNTP SRTVWVSNPT WANHQNIFET AGLTVREYGY YNANAHDIDF DAMMTDISAA NAGDIILLHG CCHNPTGIDL TLAQWDLVAQ LCADKKLVPL FDFAYQGFGV GIEEDAAGLR LVASKVPELL IANSFSKNFG LYNERIGAVT VVAENADAAE RAFSQVKRTI RANYSNPPAH GALIVSTILG DASLKAQWVQ EVTEMRERIA KMRTLFVDSL KAEGVTQDFS FISRQSGMFS FSGLNKAQVA RLKDEFGVYI VGSGRISVAG MTKTNMPVIC KAIAQVI
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