Gene Sputcn32_1937 details

Gene Information

• Locus tag: Sputcn32_1937
• Symbol: ruvC
• ID: 5078385
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella putrefaciens CN-32
• Kingdom: Bacteria
• Replicon accession: NC_009438
• Strand: +
• Start bp: 2221856
• End bp: 2222377
• Gene Length: 522 bp
• Protein Length: 173 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 640499098
• Product: Holliday junction resolvase
• Protein accession: YP_001183459
• Protein GI: 146293035
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0817] Holliday junction resolvasome, endonuclease subunit
• TIGRFAM ID: [TIGR00228] crossover junction endodeoxyribonuclease RuvC

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.00155576
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAATTA TTTTAGGTGT TGACCCAGGT TCTCGGATCA CAGGCTACGG CGTGATCCAA 
TGTCAGGGAC GACATCAGAT TTATCTCGGC AGTGGTTGTA TTCGCACTTC ATCTGAAGAG 
CTTTCTGGCA GACTTAAACA AATATTTGAT GGGATCACTG AGATTATTCG GCAGTATCAA 
CCAGATGAAT TTGCAATCGA ACGCGTATTT ATGGCCAAGA ATGCTGACTC AGCCCTAAAA 
CTTGGGCAAG CAAGAGGGGC GGCCATTGTT GCGGCGACTG TGGCAAATTT ACCTGTAGCC 
GAGTACAGTG CAACACAAAT AAAAAGTGCG GTAGTCGGTA CAGGGCGAGC TAAAAAGGAA 
CAAATACAGC ATATGATCCA GCAACTACTG AAATTACCTG CCGCACCTCA AGCGGATGCA 
GCAGATGCTC TCGGCGTTGC TGTGTGTCAT TATCACACTC GCCAAAGTTT AATTGCATTG 
AGTGGCCGAG CAACGGCAAG AACATACGGA CGGTACAGAT GA 

 

Protein sequence

MAIILGVDPG SRITGYGVIQ CQGRHQIYLG SGCIRTSSEE LSGRLKQIFD GITEIIRQYQ 
PDEFAIERVF MAKNADSALK LGQARGAAIV AATVANLPVA EYSATQIKSA VVGTGRAKKE 
QIQHMIQQLL KLPAAPQADA ADALGVAVCH YHTRQSLIAL SGRATARTYG RYR