Gene Sputcn32_1927 details

Gene Information

• Locus tag: Sputcn32_1927
• Symbol: thiH
• ID: 5078547
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella putrefaciens CN-32
• Kingdom: Bacteria
• Replicon accession: NC_009438
• Strand: +
• Start bp: 2208026
• End bp: 2209141
• Gene Length: 1116 bp
• Protein Length: 371 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 640499088
• Product: thiamine biosynthesis protein ThiH
• Protein accession: YP_001183449
• Protein GI: 146293025
• COG category: [H] Coenzyme transport and metabolism; [R] General function prediction only
• COG ID: [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes
• TIGRFAM ID: [TIGR02351] thiazole biosynthesis protein ThiH

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTTTTG TAGCGGAATT TGCCAACATC CCACGGGATA AACTGTTACT CGATTTGTAT 
TCTTGCACAG CCCAAGATGT CGAGCGGGCG TTAGTGAATC CAGCAGGGGA TTTACGCAGC 
TTACTGGCCT TGTTATCACC TGCGGCTGAA CCTTATATTG AAACCATGGC GCAGCAATCT 
GCGGCGCTTA CGCGGCAGCG ATTTGGCGCG AATCTTGGCA TGTATTTACC GCTATATGTC 
TCGAATCTGT GCGCTAATGA ATGTGATTAC TGTGGTTTTA GCATGAGTAA TAAACTCAAA 
CGCAAGACCT TGAATGAACA GGAGTTGATG GCCGAAATGG CCATTATCAA AGACAGGGGC 
TTCGATTCTA TTTTACTGGT GTCGGGTGAG CATGAAACTA AGGTCGGTAT CGATTATTTC 
AAGCAAATGT TGCCGCTGGT GAAGCAGCAA TTTAGCCATG TGGCGATGGA GGTCCAACCC 
ATGAGTGAGG ACCATTATCG CCAGTTAGTC GCGCTAGGTT TAGATGCTGT GATGATTTAT 
CAGGAGACCT ATCAGCCTGA GACTTATGCT CGTCACCATT CCCGAGGTAA AAAAATGGAT 
TTTGCCTATC GCTTAGCAAC ACCGGACAGA GTTGCGGCGG CGGGGGTCGA TAAAATTGGT 
CTTGGGGTAT TACTGGGGCT GGATGATTGG CGTTTAGATG CGTTAATGAT GGGATATCAT 
ATTGACTATT TAGAGCGTCG CTATTGGCGC ACTCGCTTTA GTATTTCGCT GCCAAGGTTA 
AGGCCTTGTA CTGGCGGGAT CACTCCAAAA GTTATTCTAT CGGATTTAGG TTTAGTACAA 
ATGATTTGTG CATTTAGACT TTTTAATCAT CAGCTTGATA TCAGCATGTC GACAAGGGAA 
AGCCCTGAGC TGAGGGATAA TCTTTTGCCA CTTGGAATTA CTCACATCAG TGCGGGCAGC 
TCGACACAAC CGGGCGGCTA TCAAGCACCT GACAGTCAAC TCGATCAATT TGAGATAAGC 
GATGATCGCA GCGTCGAGCA AGTCATCGAA CAGATGCAAC GGCAGGGTTT TAATCCAATA 
TTCAAGGATT GGGAATCTGC ATGGATAAAC AGCTAG 

 

Protein sequence

MSFVAEFANI PRDKLLLDLY SCTAQDVERA LVNPAGDLRS LLALLSPAAE PYIETMAQQS 
AALTRQRFGA NLGMYLPLYV SNLCANECDY CGFSMSNKLK RKTLNEQELM AEMAIIKDRG 
FDSILLVSGE HETKVGIDYF KQMLPLVKQQ FSHVAMEVQP MSEDHYRQLV ALGLDAVMIY 
QETYQPETYA RHHSRGKKMD FAYRLATPDR VAAAGVDKIG LGVLLGLDDW RLDALMMGYH 
IDYLERRYWR TRFSISLPRL RPCTGGITPK VILSDLGLVQ MICAFRLFNH QLDISMSTRE 
SPELRDNLLP LGITHISAGS STQPGGYQAP DSQLDQFEIS DDRSVEQVIE QMQRQGFNPI 
FKDWESAWIN S