| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1922 |
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| Symbol | |
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| ID | 5078542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 2202079 |
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| End bp | 2204217 |
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| Gene Length | 2139 bp |
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| Protein Length | 712 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640499083 |
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| Product | thiamine biosynthesis protein ThiC |
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| Protein accession | YP_001183444 |
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| Protein GI | 146293020 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
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| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCAGTT CAAATCAAAA CCTAGCTATA GCTGCCAATG CGATAGACAT CACAGCGCCA
GAATCGACAA TCCCTAATAA ATCGAAAGTG CCTAATAAAT CGGCTGAGTC TAGTCAATCA
ACAGTGCCTA AGGCACCGAG TCGCCGAGAA ATCCGCGCGC AGGCCCAAGC CTTTATCGAT
ACGTTAGCGC CGCTGCAACA TACTAATTCA CAAAAGGTTT ATCTTGAAGG TTCCAGTGCC
GATATTCGCG TTGGTATGCG ACAAATTCTG CAGACTGACA CCCTTGTCGG CGGTACAGAT
GATGCGCCTA TCATGGAAAA AAATCCGCCA ATCCGCGTGT ACGATTGCGC CGGACCTTAT
TCCGATCCTG AGGCCGATAT CAATGTGCGT CTAGGCCTTG TTAAATTAAG ACAAAACTGG
ATTCTAGCCC GCAAGGATAC AGAGCAATTA CCCTGTGCCA CCTCAGACTT TACCCAACAA
AGACTCGCCG ATGATGGTTT AGATCATCTG CGTTTTGAGG CGGGTTCGAG TGCCATTGTC
CGCCCACGCA GAGCGCTGCA GGGTAAACGA GTCAGTCAAT TACACTATGC CCGTCAAGGG
ATTATCACGC CCGAAATGGA ATATGTGGCG ATCCGCGAGA ATATGGCACT CGCCGAAGTA
CAGGATGAAA TCCTCAATCG TAAAGCCAAG GGCGAAGCCT TTGGTGCCTT AGTTGGTGAA
CCGATTACCG CCGAATTTGT CCGCGCCGAA GTTGCCCGTG GCCGCGCGAT TATTCCGCTG
AATATTAACC ATCCCGAAGC AGAACCTATG ATTATCGGGC GTAATTTTCT GGTGAAAGTG
AACGCCAATA TCGGTAACTC GGCAGTGACG TCTTCCATCG AGGAAGAAGT AGAAAAGCTC
GTCTGGTCAA CCCGTTGGGG CGCAGATACG GTAATGGATT TATCCACGGG TCGTTATATC
CACGAAACCC GCGAGTGGAT CATCCGCAAC TCGCCAGTGC CCATCGGCAC AGTGCCGATT
TATCAAGCGC TGGAGAAAGT GAACGGCGTA GCAGAGGATT TAACCTGGGA AGTGTTTCGC
GATACCTTGA TTGAACAAGC GGAGCAAGGT GTTGATTACT TTACTATTCA TGCTGGTGTA
CTGCTTCGTT ACGTGCCGAT GACGGCTAAA CGTGTCACTG GGATTGTCTC CCGCGGCGGT
TCGATTATGG CCAAATGGTG CCTGAGTCAC CACAAAGAAA ATTTCCTCTA TAGCCATTTT
CGTGAGATCT GTGAGCTTTG CGTCGCTTAC GATGTATCCC TGTCTTTAGG TGATGGTATG
CGTCCCGGAT CGATTGCCGA CGCTAATGAT GCAGCCCAGT TTGCAGAGCT TGAAACCTTA
GGGGAACTAG TCAAAATCGC CTGGGAATAC GACGTACAAA CCATTATCGA AGGGCCGGGA
CATATCCCGA TGCAGCTCAT TAAAGAGAAC ATGGACAAGC AGTTAGCTCA CTGCGGCGAA
GCGCCGTTTT ACACCCTTGG CCCACAAATC ACCGACATTG CACCTGGGTA TGATCATTTT
ACCTCCGGCA TAGGCGCGGC CATGATCGCT TGGTACGGCT GCGCTATGTT GTGTTATGTC
ACGCCAAAAG AACACTTAGG ATTACCGAAT AAACAAGATG TTAAGCAAGG TTTGATTGCT
TATAAGATTG CCGCCCACGC GGCCGATGTG GCGAAAGGTC ATCCGAGTGC GCAAATTCGT
GATAATGCGC TGGCAAAGGC GCGGTTCGAA TTCCGCTGGG AAGATCAATA TAACTTAGGA
CTCGATCCTG AAACCGCACG TGCTTATCAC GATGAATCTT TACCGCAGGA ATCCGCTAAA
GTCGCGCATT TTTGCTCTAT GTGCGGCCCT AAATTTTGTT CGATGAAAAT CACCCAAGAT
GTGCGCGCCT ATGCCGCAGG TTTAGAGGCG GCACAAACGA AGGCAGAGCA AGTTGAAGCG
GCTGCCCAAG CCATGCAAGT CACTATCAAG ACGCCGCAGG AGTTGGAAGC GGCCATGGCA
CTAAAATCGG CACAATTTGC CGCTTCGGGC GCCGAGATTT ATCAGGTGAT AGACAAGCAT
GTAAAAGACA AGCTCGTCGC CGAAGCTGAG GAAGCCTAA
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| Protein sequence | MSSSNQNLAI AANAIDITAP ESTIPNKSKV PNKSAESSQS TVPKAPSRRE IRAQAQAFID
TLAPLQHTNS QKVYLEGSSA DIRVGMRQIL QTDTLVGGTD DAPIMEKNPP IRVYDCAGPY
SDPEADINVR LGLVKLRQNW ILARKDTEQL PCATSDFTQQ RLADDGLDHL RFEAGSSAIV
RPRRALQGKR VSQLHYARQG IITPEMEYVA IRENMALAEV QDEILNRKAK GEAFGALVGE
PITAEFVRAE VARGRAIIPL NINHPEAEPM IIGRNFLVKV NANIGNSAVT SSIEEEVEKL
VWSTRWGADT VMDLSTGRYI HETREWIIRN SPVPIGTVPI YQALEKVNGV AEDLTWEVFR
DTLIEQAEQG VDYFTIHAGV LLRYVPMTAK RVTGIVSRGG SIMAKWCLSH HKENFLYSHF
REICELCVAY DVSLSLGDGM RPGSIADAND AAQFAELETL GELVKIAWEY DVQTIIEGPG
HIPMQLIKEN MDKQLAHCGE APFYTLGPQI TDIAPGYDHF TSGIGAAMIA WYGCAMLCYV
TPKEHLGLPN KQDVKQGLIA YKIAAHAADV AKGHPSAQIR DNALAKARFE FRWEDQYNLG
LDPETARAYH DESLPQESAK VAHFCSMCGP KFCSMKITQD VRAYAAGLEA AQTKAEQVEA
AAQAMQVTIK TPQELEAAMA LKSAQFAASG AEIYQVIDKH VKDKLVAEAE EA
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