Gene Sputcn32_1905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1905 
Symbol 
ID5078525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp2184224 
End bp2184811 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content46% 
IMG OID640499066 
ProductNapC/NirT family periplasmic nitrate (or nitrite) reductase c-type cytochrome 
Protein accessionYP_001183427 
Protein GI146293003 
COG category[C] Energy production and conversion 
COG ID[COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit 
TIGRFAM ID[TIGR02161] periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAGATA AATTGAAAAA GATCTGGCAA GTACTCAATC GTCCGAGTGT CCATTACAGT 
CTAGGCTTTT TGTCTTTGGG TGGGTTTGTG GCGGGTGTGA TCTTCTGGGG TGGTTTTAAC
ACTGCGCTGG AAGCAACGAA CCAAGAAGCG TTTTGTATCG GTTGCCATGA GATGGAAAAT
AACGTCTACC AAGAGTTGCA GTCGACTATC CATTTCACTA ACCGAAGTGG TGTACGGGCA
ACTTGTCCTG ATTGCCATGT GCCACATAAT TGGACGGATA AAATCGCCCG TAAAATGCAG
GCATCTAAAG AAGTATGGGG CAAAGTGTTT GGGACCATTA ATACGCGTGA AAAGTTTGAG
GATAAACGTC GCGAACTGGC AGAGCATGAA TGGGAGCGTT TAAAGGCAAA CGACTCTTTA
GAGTGTCGAA ACTGCCATAA CTTCACCTAT ATGGACTTTA CGAGACAATC ACCAAGAGCG
GCGCAGATGC ACTCCACATC GCTGGCCAGT GGTGAGAAAA CCTGTATCGA TTGCCATAAG
GGGATTGCCC ATCATCTCCC CGATATGAAG GGGGTTGAAG GGTTCTAA
 
Protein sequence
MLDKLKKIWQ VLNRPSVHYS LGFLSLGGFV AGVIFWGGFN TALEATNQEA FCIGCHEMEN 
NVYQELQSTI HFTNRSGVRA TCPDCHVPHN WTDKIARKMQ ASKEVWGKVF GTINTREKFE
DKRRELAEHE WERLKANDSL ECRNCHNFTY MDFTRQSPRA AQMHSTSLAS GEKTCIDCHK
GIAHHLPDMK GVEGF