Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1905 |
Symbol | |
ID | 5078525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 2184224 |
End bp | 2184811 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640499066 |
Product | NapC/NirT family periplasmic nitrate (or nitrite) reductase c-type cytochrome |
Protein accession | YP_001183427 |
Protein GI | 146293003 |
COG category | [C] Energy production and conversion |
COG ID | [COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit |
TIGRFAM ID | [TIGR02161] periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAGATA AATTGAAAAA GATCTGGCAA GTACTCAATC GTCCGAGTGT CCATTACAGT CTAGGCTTTT TGTCTTTGGG TGGGTTTGTG GCGGGTGTGA TCTTCTGGGG TGGTTTTAAC ACTGCGCTGG AAGCAACGAA CCAAGAAGCG TTTTGTATCG GTTGCCATGA GATGGAAAAT AACGTCTACC AAGAGTTGCA GTCGACTATC CATTTCACTA ACCGAAGTGG TGTACGGGCA ACTTGTCCTG ATTGCCATGT GCCACATAAT TGGACGGATA AAATCGCCCG TAAAATGCAG GCATCTAAAG AAGTATGGGG CAAAGTGTTT GGGACCATTA ATACGCGTGA AAAGTTTGAG GATAAACGTC GCGAACTGGC AGAGCATGAA TGGGAGCGTT TAAAGGCAAA CGACTCTTTA GAGTGTCGAA ACTGCCATAA CTTCACCTAT ATGGACTTTA CGAGACAATC ACCAAGAGCG GCGCAGATGC ACTCCACATC GCTGGCCAGT GGTGAGAAAA CCTGTATCGA TTGCCATAAG GGGATTGCCC ATCATCTCCC CGATATGAAG GGGGTTGAAG GGTTCTAA
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Protein sequence | MLDKLKKIWQ VLNRPSVHYS LGFLSLGGFV AGVIFWGGFN TALEATNQEA FCIGCHEMEN NVYQELQSTI HFTNRSGVRA TCPDCHVPHN WTDKIARKMQ ASKEVWGKVF GTINTREKFE DKRRELAEHE WERLKANDSL ECRNCHNFTY MDFTRQSPRA AQMHSTSLAS GEKTCIDCHK GIAHHLPDMK GVEGF
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