| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1887 |
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| Symbol | |
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| ID | 5080198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 2157286 |
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| End bp | 2158908 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640499045 |
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| Product | dihydrolipoamide acetyltransferase |
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| Protein accession | YP_001183409 |
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| Protein GI | 146292985 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.763867 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAAAG ATTTTATTTT GCCGGACATT GGTGAAGGCG TTGTTGAATG TGAACTCGTT
GAATGGCTGG TGAAAGAAGG CGACACTGTC GTTGAAGATC AGCCGATTGC CGATGTCATG
ACAGACAAAG CCTTAGTGCA AATCCCTGCG CCTTTTGCGG GCGTGGTCAC TAAGCTGTAT
TACGCGAAGG GCGATATTGC GAAAGTGCAT GCGCCGCTCT ATGCCGTAAA AATTGAAGAT
GCCGTTGAAA TCGCGGGCGA AGAATCTGTT GCGGCTGCAG CTGCGACAAT CGCAAAGGCT
GCTGAGCCAG TGGCAGTAAC AAACGCGACC ACGTCATCCA GTTCATCTGT CAGCATTGAA
GAATTCTTAC TACCGGATAT CGGCGAAGGC ATTGTTGAAT GTGAGCTAGT TGAATGGTTG
GTGAGTGAAG GTGATTGGGT TGAGGAAGAT CAACCGATTG CCGACGTGAT GACAGATAAA
GCGCTGGTGC AAATTCCAGC CATTAAAGCG GGTAAAATTG CCAAACTGCA TTATCGCAAA
GGTCAGCTAG CTAAAGTACA TGCGCCTTTA TTTGCCATTG AAGTTGAACA GGCGGCTTCT
ACACCTGCGG CGACAACAAA TACAGATACA GTGGCCAATG TGGCAGGTGC AGCGCAGGCT
GTGAGTGCAG AGCCTGCTCG TCAAGGTAAA GCCTTAGCCA GCCCCGCAGT TCGTCGTATG
GCGCGGTCGT TAGATATCGA TTTGAGCCAA GTACCTGGCA CAGGAAAGCA CGGCCGTGTG
TATAAGGAAG ATATCACTCG CTTCCAACAA GGCGTGAGCA ATGTTTCTGC ATCAAGTGCG
ACTCAGGTGA AAGAGGCGCC GGTTCATGCG ACTCAAGCAT CTCAAACCCA AGTTCCAATA
TCCATAGTGA CTCAACGCGC TGACACGGTT GAGCCGATTC GCGGCGTAAA AGCTGTGATG
GCACGCATGA TGGTGGAATC TGTGTCGAGC ATTCCGCACT TTACCTATTG TGAAGAGTTT
GATTTAACTG ACTTAGTTGC ACTGCGTGAA AGCATGAAAG AGAAGTATTC GTCAGATGAA
GTGAAGCTGA CCATGATGCC TTTCTTTATG AAGTCTATGT CGCTGGCTAT AGGTCAATTC
CCTGTGATGA ATAGCCAAGT GAATGCGGAT TGCACTGAGC TGACTTACAA GGCGCGTCAC
AATATCGGCA TGGCGGTGGA TTCTAAAGTC GGCCTCTTGG TGCCCAATAT CAAAGATGTG
CAGGACAAAA GCATCTTAGA AATTGCGGCA GAAATCACCC GTCTGACCCA AGCAGCCCGC
AGTGGCCGCG TGGCGCCAGC GGATCTGAAA GACGGCACGA TTTCCATCTC TAACATTGGC
GCTCTAGGTG GCACAGTGGC GACGCCTATT ATCAACAAAC CTGAGGTGGC GATTGTGGCT
TTAGGTAAGT TGCAAACCCT ACCGCGCTTT AACGCGAAAG GGGAAGTCGA AGCCCGCCAA
ATCATGCAAG TGAGCTGGTC AGGTGACCAT AGAGTGATCG ATGGCGGCAC CATTGCTCGC
TTCTGTAATC TGTGGAAACA GTATCTTGAG CAGCCTCAAG AGATGTTATT AGCGATGCGC
TAA
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| Protein sequence | MIKDFILPDI GEGVVECELV EWLVKEGDTV VEDQPIADVM TDKALVQIPA PFAGVVTKLY
YAKGDIAKVH APLYAVKIED AVEIAGEESV AAAAATIAKA AEPVAVTNAT TSSSSSVSIE
EFLLPDIGEG IVECELVEWL VSEGDWVEED QPIADVMTDK ALVQIPAIKA GKIAKLHYRK
GQLAKVHAPL FAIEVEQAAS TPAATTNTDT VANVAGAAQA VSAEPARQGK ALASPAVRRM
ARSLDIDLSQ VPGTGKHGRV YKEDITRFQQ GVSNVSASSA TQVKEAPVHA TQASQTQVPI
SIVTQRADTV EPIRGVKAVM ARMMVESVSS IPHFTYCEEF DLTDLVALRE SMKEKYSSDE
VKLTMMPFFM KSMSLAIGQF PVMNSQVNAD CTELTYKARH NIGMAVDSKV GLLVPNIKDV
QDKSILEIAA EITRLTQAAR SGRVAPADLK DGTISISNIG ALGGTVATPI INKPEVAIVA
LGKLQTLPRF NAKGEVEARQ IMQVSWSGDH RVIDGGTIAR FCNLWKQYLE QPQEMLLAMR
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