| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1885 |
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| Symbol | |
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| ID | 5080196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 2155117 |
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| End bp | 2156295 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640499043 |
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| Product | 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) |
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| Protein accession | YP_001183407 |
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| Protein GI | 146292983 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.88408 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAAG CAACACTCAA CACTGATACA GTGCACCGTG TCGGCTTCTT GGATAAGGCA
TCGCTACACA TTCCTATCCT TCGAATTCTA CAAGCCGACG GCACCACTTA TGAAACCGCG
GTTTTGCCTG TGATAGATGA AACCTTAGCC ACTAAAATTT ACGATACCTG TGTATTCACT
CGGGTACTTG ATGAACGTAT GCTTGGCGCC CAGCGTCAAG GGCGCATCAG CTTCTACATG
ACCTGTACGG GTGAAGAAGC GGCGATTGTC GGCAGTGTGG CCGCACTCGA TCAAGAAGAT
GTGATCCTCG CGCAATATCG TGAGCATGCA GCGCTGCGTT ATCGCGGCTT TACTACTGAA
CAGTTTATGA ATCAGATGTT CAGTAACGAG AAAGATCTTG GTAAAGGTCG ACAAATGCCA
ATCCATTACG GCAGTGCGGC ATTGCATTAT CAAACGATTT CTTCACCGTT AGCCACGCAA
ATCCCGCAGG CGACGGGTGT GGGCTACAGC TTAAAAATGC AAGGTAAGCG CAAAGTCGCG
GTTTGTTATT TTGGCGAAGG CGCTGCATCG GAAGGGGACT TCCATGCCGG TCTAAACATG
GCCGCGGTAC TGAAATGCCC AGTGATTTTC TTCTGTCGTA ACAATGGCTA CGCGATTTCT
ACGCCCACCG AAGAGCAGTT TGCCGGTAAC GGTATTGCCA GCCGCGGTGT CGGTTATGGC
ATGCACACCA TTCGTGTTGA TGGTAATGAC ATGTTGGCCG TGTTAGCCGC AACCCAGCAA
GCCCGTGCCT ATGCGATTGA GCATAATGCG CCTGTGCTGA TTGAAGCCAT GACTTACCGT
CTCGGCGCAC ACTCTTCTTC AGACGATCCC TCTGGTTATC GCTCGAAAGA TGAAGAAGCC
AAGTGGCAGC AACACGATCC GGTTAAACGC TTCAAATTAT GGCTTATCAA CAAAGGTTGG
TTGGCTGAAG CGGATGATGT GAAACTGCAT GAGAAATATC GTGAAGAAGT ATTGGCTGCG
GTAAAAGTGG CTGAAAAAAT TCCTGTGCCT ATGCTGGATG AAATTATTGA AGATGTGTAC
GACAAGCCGA CGCCAGTGCT GAAAAAGCAA CTCGCCGATC TTAAAGAACA TATCAAGAAA
TATCCGCAAG CCTATCCAAA AAGTGCTGGG AGACTATAA
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| Protein sequence | MSKATLNTDT VHRVGFLDKA SLHIPILRIL QADGTTYETA VLPVIDETLA TKIYDTCVFT
RVLDERMLGA QRQGRISFYM TCTGEEAAIV GSVAALDQED VILAQYREHA ALRYRGFTTE
QFMNQMFSNE KDLGKGRQMP IHYGSAALHY QTISSPLATQ IPQATGVGYS LKMQGKRKVA
VCYFGEGAAS EGDFHAGLNM AAVLKCPVIF FCRNNGYAIS TPTEEQFAGN GIASRGVGYG
MHTIRVDGND MLAVLAATQQ ARAYAIEHNA PVLIEAMTYR LGAHSSSDDP SGYRSKDEEA
KWQQHDPVKR FKLWLINKGW LAEADDVKLH EKYREEVLAA VKVAEKIPVP MLDEIIEDVY
DKPTPVLKKQ LADLKEHIKK YPQAYPKSAG RL
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