Gene Sputcn32_1881 details

Gene Information

• Locus tag: Sputcn32_1881
• ID: 5080192
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella putrefaciens CN-32
• Kingdom: Bacteria
• Replicon accession: NC_009438
• Strand: +
• Start bp: 2150804
• End bp: 2151361
• Gene Length: 558 bp
• Protein Length: 185 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 640499039
• Product: replication initiation regulator SeqA
• Protein accession: YP_001183403
• Protein GI: 146292979
• COG category: [L] Replication, recombination and repair
• COG ID: [COG3057] Negative regulator of replication initiationR

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.000742914
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATATA TCGAAGTGGA TGAAGAGCTC TATCGTCATA TTGCCAGCAA AACAGAACGT 
ATTGGTGAGA GCGCCTCTGA CATTCTGCGT CGATTACTCG GCCTATCCGT GAATACGATT 
GAACAAGTTG AGCCACAGGC AATTAGCCAA CCCAGTTTAG AAGCCGTTGA ACAGAAACCG 
TTGGTTACGT CAGTACCAGT CATAGAGTCG TCAGTTCCTG TCAGCGATTT TAAACAATTA 
GTGGATGAGC ATAAGTTAGC CCAGCAAAAA GGGGCTGTTG GCCGTTTCTT ATTTTTGCTT 
GAAAGTTTAT ATCAGCAAAG CCAATCGCAA TTTTCACAAA TTTTACAGAT CCAAGGGCGC 
GATCGACTTT ATTTTGCACG CTCACGTGAA GAGTTATTGA AAGCAAGTCC TTCGGCCAAT 
CCGAAGGAAA TTGGCAGCAG CGGTTTTTGG GTGACGACAA ATAATAATAC TGCCAAAAAA 
CAGGCGATTT TGGTCGAGGT ATTGGTACAG TTTGGTTGTG ATGCTGAAGT TGCCTACGCT 
ATTTCCCAGC GTGTTTAA 

 

Protein sequence

MKYIEVDEEL YRHIASKTER IGESASDILR RLLGLSVNTI EQVEPQAISQ PSLEAVEQKP 
LVTSVPVIES SVPVSDFKQL VDEHKLAQQK GAVGRFLFLL ESLYQQSQSQ FSQILQIQGR 
DRLYFARSRE ELLKASPSAN PKEIGSSGFW VTTNNNTAKK QAILVEVLVQ FGCDAEVAYA 
ISQRV